Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.45■□□□□ 0.06
Clip4Q8CI96 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.45■□□□□ 0.06
Clip4Q8CI96 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.45■□□□□ 0.06
Clip4Q8CI96 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clip4Q8CI96 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Gm9172-201ENSMUST00000212092 954 ntBASIC15.44■□□□□ 0.06
Clip4Q8CI96 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.44■□□□□ 0.06
Clip4Q8CI96 Mzt1-203ENSMUST00000227948 952 ntBASIC15.44■□□□□ 0.06
Clip4Q8CI96 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.44■□□□□ 0.06
Clip4Q8CI96 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Clip4Q8CI96 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Clip4Q8CI96 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Clip4Q8CI96 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clip4Q8CI96 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clip4Q8CI96 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clip4Q8CI96 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clip4Q8CI96 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Clip4Q8CI96 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.43■□□□□ 0.06
Clip4Q8CI96 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clip4Q8CI96 Gm44357-201ENSMUST00000195897 142 ntBASIC15.43■□□□□ 0.06
Clip4Q8CI96 Gm19658-201ENSMUST00000196231 138 ntBASIC15.43■□□□□ 0.06
Clip4Q8CI96 Gm44367-201ENSMUST00000196836 138 ntBASIC15.43■□□□□ 0.06
Clip4Q8CI96 Gm44350-201ENSMUST00000197197 138 ntBASIC15.43■□□□□ 0.06
Clip4Q8CI96 Gm44390-201ENSMUST00000197533 144 ntBASIC15.43■□□□□ 0.06
Clip4Q8CI96 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.43■□□□□ 0.06
Clip4Q8CI96 Gm44313-201ENSMUST00000198018 138 ntBASIC15.43■□□□□ 0.06
Clip4Q8CI96 Gm44486-201ENSMUST00000198508 138 ntBASIC15.43■□□□□ 0.06
Clip4Q8CI96 Gm44314-201ENSMUST00000199263 138 ntBASIC15.43■□□□□ 0.06
Clip4Q8CI96 Gm44394-201ENSMUST00000199558 138 ntBASIC15.43■□□□□ 0.06
Clip4Q8CI96 Gm44484-201ENSMUST00000199873 138 ntBASIC15.43■□□□□ 0.06
Clip4Q8CI96 Gm44466-201ENSMUST00000200264 138 ntBASIC15.43■□□□□ 0.06
Clip4Q8CI96 Gm44359-201ENSMUST00000200671 138 ntBASIC15.43■□□□□ 0.06
Clip4Q8CI96 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.43■□□□□ 0.06
Clip4Q8CI96 Gm6296-201ENSMUST00000222599 943 ntBASIC15.43■□□□□ 0.06
Clip4Q8CI96 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clip4Q8CI96 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Clip4Q8CI96 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clip4Q8CI96 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Clip4Q8CI96 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clip4Q8CI96 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clip4Q8CI96 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clip4Q8CI96 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clip4Q8CI96 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Clip4Q8CI96 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clip4Q8CI96 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Clip4Q8CI96 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clip4Q8CI96 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Clip4Q8CI96 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clip4Q8CI96 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Clip4Q8CI96 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms