Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Zc3h3Q8CHP0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Zc3h3Q8CHP0 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Zc3h3Q8CHP0 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Zc3h3Q8CHP0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Zc3h3Q8CHP0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Zc3h3Q8CHP0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Zc3h3Q8CHP0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Zc3h3Q8CHP0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Zc3h3Q8CHP0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Zc3h3Q8CHP0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Zc3h3Q8CHP0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Zc3h3Q8CHP0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Zc3h3Q8CHP0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Zc3h3Q8CHP0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Zc3h3Q8CHP0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Zc3h3Q8CHP0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Gm15806-201ENSMUST00000120696 955 ntBASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Mir1897-201ENSMUST00000122581 272 ntBASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Zc3h3Q8CHP0 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Zc3h3Q8CHP0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Zc3h3Q8CHP0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.86□□□□□ -0.03
Zc3h3Q8CHP0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Zc3h3Q8CHP0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Zc3h3Q8CHP0 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Zc3h3Q8CHP0 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Zc3h3Q8CHP0 Gm12742-201ENSMUST00000117326 410 ntBASIC14.86□□□□□ -0.03
Zc3h3Q8CHP0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.86□□□□□ -0.03
Zc3h3Q8CHP0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.86□□□□□ -0.03
Zc3h3Q8CHP0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.86□□□□□ -0.03
Zc3h3Q8CHP0 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.86□□□□□ -0.03
Zc3h3Q8CHP0 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Zc3h3Q8CHP0 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.86□□□□□ -0.03
Zc3h3Q8CHP0 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Zc3h3Q8CHP0 Gm27892-201ENSMUST00000185017 106 ntBASIC14.86□□□□□ -0.03
Zc3h3Q8CHP0 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.86□□□□□ -0.03
Zc3h3Q8CHP0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Zc3h3Q8CHP0 Gm45841-201ENSMUST00000207700 164 ntBASIC14.86□□□□□ -0.03
Zc3h3Q8CHP0 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.86□□□□□ -0.03
Zc3h3Q8CHP0 Gm46209-201ENSMUST00000217912 553 ntBASIC14.86□□□□□ -0.03
Zc3h3Q8CHP0 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.86□□□□□ -0.03
Zc3h3Q8CHP0 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.86□□□□□ -0.03
Zc3h3Q8CHP0 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Zc3h3Q8CHP0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Zc3h3Q8CHP0 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Zc3h3Q8CHP0 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms