Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Ank2-226ENSMUST00000189368 339 ntBASIC17.56■□□□□ 0.4
Smc2Q8CG48 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc2Q8CG48 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Smc2Q8CG48 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc2Q8CG48 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc2Q8CG48 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smc2Q8CG48 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Smc2Q8CG48 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc2Q8CG48 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc2Q8CG48 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc2Q8CG48 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc2Q8CG48 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc2Q8CG48 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc2Q8CG48 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc2Q8CG48 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smc2Q8CG48 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Smc2Q8CG48 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc2Q8CG48 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Gm21362-201ENSMUST00000194272 928 ntBASIC17.55■□□□□ 0.4
Smc2Q8CG48 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.55■□□□□ 0.4
Smc2Q8CG48 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Smc2Q8CG48 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc2Q8CG48 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc2Q8CG48 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc2Q8CG48 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc2Q8CG48 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc2Q8CG48 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc2Q8CG48 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc2Q8CG48 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc2Q8CG48 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smc2Q8CG48 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smc2Q8CG48 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.54■□□□□ 0.4
Smc2Q8CG48 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc2Q8CG48 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc2Q8CG48 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Smc2Q8CG48 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Smc2Q8CG48 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smc2Q8CG48 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smc2Q8CG48 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Smc2Q8CG48 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc2Q8CG48 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc2Q8CG48 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc2Q8CG48 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc2Q8CG48 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc2Q8CG48 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smc2Q8CG48 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.53■□□□□ 0.4
Smc2Q8CG48 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Smc2Q8CG48 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.53■□□□□ 0.4
Smc2Q8CG48 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.53■□□□□ 0.4
Smc2Q8CG48 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.53■□□□□ 0.4
Smc2Q8CG48 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.53■□□□□ 0.4
Smc2Q8CG48 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.53■□□□□ 0.4
Smc2Q8CG48 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc2Q8CG48 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc2Q8CG48 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc2Q8CG48 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc2Q8CG48 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc2Q8CG48 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smc2Q8CG48 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc2Q8CG48 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc2Q8CG48 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smc2Q8CG48 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Smc2Q8CG48 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Smc2Q8CG48 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc2Q8CG48 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smc2Q8CG48 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smc2Q8CG48 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smc2Q8CG48 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smc2Q8CG48 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smc2Q8CG48 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Smc2Q8CG48 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Smc2Q8CG48 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smc2Q8CG48 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms