Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc5Q8CG46 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc5Q8CG46 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc5Q8CG46 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc5Q8CG46 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc5Q8CG46 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc5Q8CG46 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc5Q8CG46 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc5Q8CG46 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smc5Q8CG46 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc5Q8CG46 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc5Q8CG46 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc5Q8CG46 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc5Q8CG46 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc5Q8CG46 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc5Q8CG46 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc5Q8CG46 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc5Q8CG46 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc5Q8CG46 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Smc5Q8CG46 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smc5Q8CG46 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc5Q8CG46 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc5Q8CG46 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc5Q8CG46 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smc5Q8CG46 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc5Q8CG46 Gm15358-201ENSMUST00000119249 520 ntBASIC18.95■□□□□ 0.62
Smc5Q8CG46 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc5Q8CG46 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc5Q8CG46 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.95■□□□□ 0.62
Smc5Q8CG46 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Smc5Q8CG46 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.95■□□□□ 0.62
Smc5Q8CG46 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.95■□□□□ 0.62
Smc5Q8CG46 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc5Q8CG46 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc5Q8CG46 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Smc5Q8CG46 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Smc5Q8CG46 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc5Q8CG46 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
Smc5Q8CG46 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc5Q8CG46 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smc5Q8CG46 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Carlr-201ENSMUST00000181515 2574 ntBASIC18.94■□□□□ 0.62
Smc5Q8CG46 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.94■□□□□ 0.62
Smc5Q8CG46 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc5Q8CG46 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Smc5Q8CG46 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smc5Q8CG46 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smc5Q8CG46 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC18.93■□□□□ 0.62
Smc5Q8CG46 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smc5Q8CG46 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smc5Q8CG46 Sorbs3-204ENSMUST00000227929 2460 ntBASIC18.93■□□□□ 0.62
Smc5Q8CG46 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Smc5Q8CG46 Gm15372-201ENSMUST00000120729 834 ntBASIC18.93■□□□□ 0.62
Smc5Q8CG46 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Smc5Q8CG46 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smc5Q8CG46 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smc5Q8CG46 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.93■□□□□ 0.62
Smc5Q8CG46 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Smc5Q8CG46 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smc5Q8CG46 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Smc5Q8CG46 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Smc5Q8CG46 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smc5Q8CG46 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smc5Q8CG46 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smc5Q8CG46 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smc5Q8CG46 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smc5Q8CG46 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smc5Q8CG46 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smc5Q8CG46 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smc5Q8CG46 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smc5Q8CG46 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smc5Q8CG46 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smc5Q8CG46 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smc5Q8CG46 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smc5Q8CG46 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms