Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Gm12497-201ENSMUST00000138778 237 ntBASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcpip1Q8CDG3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vcpip1Q8CDG3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vcpip1Q8CDG3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vcpip1Q8CDG3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vcpip1Q8CDG3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vcpip1Q8CDG3 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Gm27867-201ENSMUST00000184778 125 ntBASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Grk6-207ENSMUST00000225925 2769 ntBASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Vcpip1Q8CDG3 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 Gm14722-201ENSMUST00000118943 689 ntBASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 Gm34391-201ENSMUST00000203706 907 ntBASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vcpip1Q8CDG3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vcpip1Q8CDG3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vcpip1Q8CDG3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vcpip1Q8CDG3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vcpip1Q8CDG3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vcpip1Q8CDG3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vcpip1Q8CDG3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vcpip1Q8CDG3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Vcpip1Q8CDG3 Gm12895-201ENSMUST00000122214 226 ntBASIC16.43■□□□□ 0.22
Vcpip1Q8CDG3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms