Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Alx1Q8C8B0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Alx1Q8C8B0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Alx1Q8C8B0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Alx1Q8C8B0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Alx1Q8C8B0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Alx1Q8C8B0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Alx1Q8C8B0 Gm4995-201ENSMUST00000117247 432 ntBASIC17.82■□□□□ 0.44
Alx1Q8C8B0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.82■□□□□ 0.44
Alx1Q8C8B0 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.82■□□□□ 0.44
Alx1Q8C8B0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.82■□□□□ 0.44
Alx1Q8C8B0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Alx1Q8C8B0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Alx1Q8C8B0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Alx1Q8C8B0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Alx1Q8C8B0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Alx1Q8C8B0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Alx1Q8C8B0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Alx1Q8C8B0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Alx1Q8C8B0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Alx1Q8C8B0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Alx1Q8C8B0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Alx1Q8C8B0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Alx1Q8C8B0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alx1Q8C8B0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.81■□□□□ 0.44
Alx1Q8C8B0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alx1Q8C8B0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Alx1Q8C8B0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alx1Q8C8B0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alx1Q8C8B0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alx1Q8C8B0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Alx1Q8C8B0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Alx1Q8C8B0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alx1Q8C8B0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alx1Q8C8B0 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.81■□□□□ 0.44
Alx1Q8C8B0 Gm25911-201ENSMUST00000157621 56 ntBASIC17.81■□□□□ 0.44
Alx1Q8C8B0 Gm27301-201ENSMUST00000184012 127 ntBASIC17.81■□□□□ 0.44
Alx1Q8C8B0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.81■□□□□ 0.44
Alx1Q8C8B0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.81■□□□□ 0.44
Alx1Q8C8B0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.81■□□□□ 0.44
Alx1Q8C8B0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.81■□□□□ 0.44
Alx1Q8C8B0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Alx1Q8C8B0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Alx1Q8C8B0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alx1Q8C8B0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alx1Q8C8B0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alx1Q8C8B0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alx1Q8C8B0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alx1Q8C8B0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alx1Q8C8B0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alx1Q8C8B0 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alx1Q8C8B0 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Alx1Q8C8B0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alx1Q8C8B0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alx1Q8C8B0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alx1Q8C8B0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alx1Q8C8B0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alx1Q8C8B0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Alx1Q8C8B0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Alx1Q8C8B0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
Alx1Q8C8B0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alx1Q8C8B0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Alx1Q8C8B0 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alx1Q8C8B0 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alx1Q8C8B0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alx1Q8C8B0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Alx1Q8C8B0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alx1Q8C8B0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alx1Q8C8B0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alx1Q8C8B0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alx1Q8C8B0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Alx1Q8C8B0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Alx1Q8C8B0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Alx1Q8C8B0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Alx1Q8C8B0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.79■□□□□ 0.44
Alx1Q8C8B0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.79■□□□□ 0.44
Alx1Q8C8B0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.79■□□□□ 0.44
Alx1Q8C8B0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.79■□□□□ 0.44
Alx1Q8C8B0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.79■□□□□ 0.44
Alx1Q8C8B0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Alx1Q8C8B0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Alx1Q8C8B0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Alx1Q8C8B0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Alx1Q8C8B0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.79■□□□□ 0.44
Alx1Q8C8B0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Alx1Q8C8B0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.79■□□□□ 0.44
Alx1Q8C8B0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Alx1Q8C8B0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Alx1Q8C8B0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alx1Q8C8B0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alx1Q8C8B0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alx1Q8C8B0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alx1Q8C8B0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Alx1Q8C8B0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Alx1Q8C8B0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.78■□□□□ 0.44
Alx1Q8C8B0 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.78■□□□□ 0.44
Alx1Q8C8B0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.78■□□□□ 0.44
Alx1Q8C8B0 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.78■□□□□ 0.44
Alx1Q8C8B0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alx1Q8C8B0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms