Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lin9Q8C735 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lin9Q8C735 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lin9Q8C735 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lin9Q8C735 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lin9Q8C735 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Lin9Q8C735 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lin9Q8C735 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lin9Q8C735 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Lin9Q8C735 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lin9Q8C735 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Lin9Q8C735 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lin9Q8C735 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lin9Q8C735 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Lin9Q8C735 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lin9Q8C735 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lin9Q8C735 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lin9Q8C735 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lin9Q8C735 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lin9Q8C735 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lin9Q8C735 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lin9Q8C735 Gm11780-201ENSMUST00000136880 516 ntBASIC16.74■□□□□ 0.27
Lin9Q8C735 Gm25925-201ENSMUST00000158314 306 ntBASIC16.74■□□□□ 0.27
Lin9Q8C735 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Lin9Q8C735 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lin9Q8C735 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.74■□□□□ 0.27
Lin9Q8C735 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.74■□□□□ 0.27
Lin9Q8C735 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.74■□□□□ 0.27
Lin9Q8C735 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lin9Q8C735 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lin9Q8C735 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lin9Q8C735 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lin9Q8C735 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.74■□□□□ 0.27
Lin9Q8C735 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Lin9Q8C735 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lin9Q8C735 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lin9Q8C735 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.74■□□□□ 0.27
Lin9Q8C735 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Lin9Q8C735 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lin9Q8C735 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lin9Q8C735 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.73■□□□□ 0.27
Lin9Q8C735 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lin9Q8C735 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lin9Q8C735 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lin9Q8C735 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lin9Q8C735 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.73■□□□□ 0.27
Lin9Q8C735 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lin9Q8C735 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lin9Q8C735 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lin9Q8C735 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lin9Q8C735 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.73■□□□□ 0.27
Lin9Q8C735 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.73■□□□□ 0.27
Lin9Q8C735 Gm11779-201ENSMUST00000118541 368 ntBASIC16.73■□□□□ 0.27
Lin9Q8C735 Gm8344-201ENSMUST00000119813 856 ntBASIC16.73■□□□□ 0.27
Lin9Q8C735 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.73■□□□□ 0.27
Lin9Q8C735 Gm12260-201ENSMUST00000122447 411 ntBASIC16.73■□□□□ 0.27
Lin9Q8C735 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.73■□□□□ 0.27
Lin9Q8C735 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lin9Q8C735 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lin9Q8C735 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Lin9Q8C735 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lin9Q8C735 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lin9Q8C735 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lin9Q8C735 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lin9Q8C735 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lin9Q8C735 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lin9Q8C735 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lin9Q8C735 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.72■□□□□ 0.27
Lin9Q8C735 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Lin9Q8C735 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lin9Q8C735 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lin9Q8C735 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lin9Q8C735 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lin9Q8C735 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Lin9Q8C735 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.72■□□□□ 0.27
Lin9Q8C735 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.72■□□□□ 0.27
Lin9Q8C735 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.72■□□□□ 0.27
Lin9Q8C735 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.72■□□□□ 0.27
Lin9Q8C735 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.72■□□□□ 0.27
Lin9Q8C735 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.72■□□□□ 0.27
Lin9Q8C735 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lin9Q8C735 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lin9Q8C735 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lin9Q8C735 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lin9Q8C735 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lin9Q8C735 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lin9Q8C735 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lin9Q8C735 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lin9Q8C735 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lin9Q8C735 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lin9Q8C735 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lin9Q8C735 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Lin9Q8C735 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lin9Q8C735 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lin9Q8C735 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.71■□□□□ 0.27
Lin9Q8C735 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lin9Q8C735 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lin9Q8C735 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.71■□□□□ 0.27
Lin9Q8C735 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lin9Q8C735 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms