Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rft1Q8C3B8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rft1Q8C3B8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Rft1Q8C3B8 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rft1Q8C3B8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rft1Q8C3B8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rft1Q8C3B8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rft1Q8C3B8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rft1Q8C3B8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rft1Q8C3B8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rft1Q8C3B8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rft1Q8C3B8 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rft1Q8C3B8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rft1Q8C3B8 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rft1Q8C3B8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Gm27357-201ENSMUST00000183754 135 ntBASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Gm18669-201ENSMUST00000216049 778 ntBASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rft1Q8C3B8 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Gm44430-201ENSMUST00000203376 995 ntBASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rft1Q8C3B8 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms