Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Gm17971-201ENSMUST00000190239 806 ntBASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps9d1Q8C190 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Vps9d1Q8C190 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps9d1Q8C190 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps9d1Q8C190 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps9d1Q8C190 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps9d1Q8C190 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.35□□□□□ -0.11
Vps9d1Q8C190 Gm28033-201ENSMUST00000184224 96 ntBASIC14.35□□□□□ -0.11
Vps9d1Q8C190 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps9d1Q8C190 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps9d1Q8C190 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps9d1Q8C190 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps9d1Q8C190 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps9d1Q8C190 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps9d1Q8C190 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Vps9d1Q8C190 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps9d1Q8C190 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps9d1Q8C190 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.35□□□□□ -0.11
Vps9d1Q8C190 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Vps9d1Q8C190 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Vps9d1Q8C190 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Gm18669-201ENSMUST00000216049 778 ntBASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps9d1Q8C190 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps9d1Q8C190 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Vps9d1Q8C190 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps9d1Q8C190 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps9d1Q8C190 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps9d1Q8C190 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps9d1Q8C190 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vps9d1Q8C190 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps9d1Q8C190 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vps9d1Q8C190 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Vps9d1Q8C190 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps9d1Q8C190 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Vps9d1Q8C190 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps9d1Q8C190 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps9d1Q8C190 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Vps9d1Q8C190 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps9d1Q8C190 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms