Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim47Q8C0E3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim47Q8C0E3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim47Q8C0E3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim47Q8C0E3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim47Q8C0E3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim47Q8C0E3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim47Q8C0E3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim47Q8C0E3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim47Q8C0E3 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.94■□□□□ 0.3
Trim47Q8C0E3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim47Q8C0E3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim47Q8C0E3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Trim47Q8C0E3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim47Q8C0E3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim47Q8C0E3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.94■□□□□ 0.3
Trim47Q8C0E3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trim47Q8C0E3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim47Q8C0E3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim47Q8C0E3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim47Q8C0E3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim47Q8C0E3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim47Q8C0E3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim47Q8C0E3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trim47Q8C0E3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim47Q8C0E3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim47Q8C0E3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim47Q8C0E3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim47Q8C0E3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim47Q8C0E3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim47Q8C0E3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim47Q8C0E3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim47Q8C0E3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim47Q8C0E3 Gm44492-201ENSMUST00000197012 141 ntBASIC16.93■□□□□ 0.3
Trim47Q8C0E3 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.93■□□□□ 0.3
Trim47Q8C0E3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim47Q8C0E3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim47Q8C0E3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim47Q8C0E3 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim47Q8C0E3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim47Q8C0E3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim47Q8C0E3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim47Q8C0E3 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim47Q8C0E3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim47Q8C0E3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim47Q8C0E3 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim47Q8C0E3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim47Q8C0E3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim47Q8C0E3 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim47Q8C0E3 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim47Q8C0E3 Gm45747-201ENSMUST00000212203 999 ntBASIC16.92■□□□□ 0.3
Trim47Q8C0E3 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim47Q8C0E3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim47Q8C0E3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim47Q8C0E3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim47Q8C0E3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim47Q8C0E3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Trim47Q8C0E3 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim47Q8C0E3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim47Q8C0E3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trim47Q8C0E3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Trim47Q8C0E3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim47Q8C0E3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trim47Q8C0E3 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim47Q8C0E3 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim47Q8C0E3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim47Q8C0E3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.92■□□□□ 0.3
Trim47Q8C0E3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim47Q8C0E3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim47Q8C0E3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trim47Q8C0E3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim47Q8C0E3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim47Q8C0E3 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim47Q8C0E3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.91■□□□□ 0.3
Trim47Q8C0E3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim47Q8C0E3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim47Q8C0E3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Trim47Q8C0E3 Gm5177-201ENSMUST00000183092 997 ntBASIC16.91■□□□□ 0.3
Trim47Q8C0E3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Trim47Q8C0E3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim47Q8C0E3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim47Q8C0E3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim47Q8C0E3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.91■□□□□ 0.3
Trim47Q8C0E3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim47Q8C0E3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim47Q8C0E3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim47Q8C0E3 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trim47Q8C0E3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim47Q8C0E3 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim47Q8C0E3 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim47Q8C0E3 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim47Q8C0E3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim47Q8C0E3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim47Q8C0E3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim47Q8C0E3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim47Q8C0E3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim47Q8C0E3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim47Q8C0E3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trim47Q8C0E3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Trim47Q8C0E3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms