Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cpne3Q8BT60 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne3Q8BT60 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne3Q8BT60 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cpne3Q8BT60 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne3Q8BT60 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne3Q8BT60 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Cpne3Q8BT60 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.83□□□□□ -0.04
Cpne3Q8BT60 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.83□□□□□ -0.04
Cpne3Q8BT60 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne3Q8BT60 Gm9172-201ENSMUST00000212092 954 ntBASIC14.83□□□□□ -0.04
Cpne3Q8BT60 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne3Q8BT60 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.83□□□□□ -0.04
Cpne3Q8BT60 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne3Q8BT60 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne3Q8BT60 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne3Q8BT60 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne3Q8BT60 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne3Q8BT60 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne3Q8BT60 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne3Q8BT60 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.83□□□□□ -0.04
Cpne3Q8BT60 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne3Q8BT60 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne3Q8BT60 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne3Q8BT60 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Cpne3Q8BT60 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne3Q8BT60 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.82□□□□□ -0.04
Cpne3Q8BT60 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne3Q8BT60 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.82□□□□□ -0.04
Cpne3Q8BT60 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne3Q8BT60 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne3Q8BT60 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne3Q8BT60 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne3Q8BT60 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne3Q8BT60 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.82□□□□□ -0.04
Cpne3Q8BT60 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne3Q8BT60 Gm15165-201ENSMUST00000118140 502 ntBASIC14.82□□□□□ -0.04
Cpne3Q8BT60 Gm25745-201ENSMUST00000174945 133 ntBASIC14.82□□□□□ -0.04
Cpne3Q8BT60 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne3Q8BT60 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne3Q8BT60 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.82□□□□□ -0.04
Cpne3Q8BT60 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.82□□□□□ -0.04
Cpne3Q8BT60 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne3Q8BT60 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.82□□□□□ -0.04
Cpne3Q8BT60 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Cpne3Q8BT60 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne3Q8BT60 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.82□□□□□ -0.04
Cpne3Q8BT60 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne3Q8BT60 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne3Q8BT60 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne3Q8BT60 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne3Q8BT60 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Gm27867-201ENSMUST00000184778 125 ntBASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Gm33142-201ENSMUST00000193913 867 ntBASIC14.81□□□□□ -0.04
Cpne3Q8BT60 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Grk6-207ENSMUST00000225925 2769 ntBASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 BC037039-201ENSMUST00000192003 2205 ntBASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cpne3Q8BT60 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms