Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nop53Q8BK35 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nop53Q8BK35 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nop53Q8BK35 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nop53Q8BK35 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.43■□□□□ 0.22
Nop53Q8BK35 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.43■□□□□ 0.22
Nop53Q8BK35 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.43■□□□□ 0.22
Nop53Q8BK35 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Nop53Q8BK35 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.43■□□□□ 0.22
Nop53Q8BK35 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.43■□□□□ 0.22
Nop53Q8BK35 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.43■□□□□ 0.22
Nop53Q8BK35 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.43■□□□□ 0.22
Nop53Q8BK35 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nop53Q8BK35 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.43■□□□□ 0.22
Nop53Q8BK35 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.43■□□□□ 0.22
Nop53Q8BK35 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Nop53Q8BK35 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nop53Q8BK35 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nop53Q8BK35 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.43■□□□□ 0.22
Nop53Q8BK35 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.43■□□□□ 0.22
Nop53Q8BK35 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.43■□□□□ 0.22
Nop53Q8BK35 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.43■□□□□ 0.22
Nop53Q8BK35 Gm8825-201ENSMUST00000182565 998 ntBASIC16.43■□□□□ 0.22
Nop53Q8BK35 Gm4518-201ENSMUST00000182638 718 ntBASIC16.43■□□□□ 0.22
Nop53Q8BK35 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.43■□□□□ 0.22
Nop53Q8BK35 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.43■□□□□ 0.22
Nop53Q8BK35 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.43■□□□□ 0.22
Nop53Q8BK35 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.43■□□□□ 0.22
Nop53Q8BK35 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.43■□□□□ 0.22
Nop53Q8BK35 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.43■□□□□ 0.22
Nop53Q8BK35 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nop53Q8BK35 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.43■□□□□ 0.22
Nop53Q8BK35 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nop53Q8BK35 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nop53Q8BK35 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nop53Q8BK35 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nop53Q8BK35 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Nop53Q8BK35 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nop53Q8BK35 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nop53Q8BK35 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nop53Q8BK35 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Nop53Q8BK35 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nop53Q8BK35 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nop53Q8BK35 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nop53Q8BK35 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nop53Q8BK35 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nop53Q8BK35 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nop53Q8BK35 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nop53Q8BK35 Gm7153-201ENSMUST00000117092 455 ntBASIC16.42■□□□□ 0.22
Nop53Q8BK35 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Nop53Q8BK35 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.42■□□□□ 0.22
Nop53Q8BK35 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nop53Q8BK35 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nop53Q8BK35 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nop53Q8BK35 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nop53Q8BK35 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nop53Q8BK35 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Nop53Q8BK35 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.42■□□□□ 0.22
Nop53Q8BK35 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nop53Q8BK35 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.42■□□□□ 0.22
Nop53Q8BK35 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nop53Q8BK35 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nop53Q8BK35 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.42■□□□□ 0.22
Nop53Q8BK35 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nop53Q8BK35 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nop53Q8BK35 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.41■□□□□ 0.22
Nop53Q8BK35 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nop53Q8BK35 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nop53Q8BK35 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nop53Q8BK35 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nop53Q8BK35 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nop53Q8BK35 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nop53Q8BK35 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.41■□□□□ 0.22
Nop53Q8BK35 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.41■□□□□ 0.22
Nop53Q8BK35 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nop53Q8BK35 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nop53Q8BK35 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nop53Q8BK35 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nop53Q8BK35 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.41■□□□□ 0.22
Nop53Q8BK35 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nop53Q8BK35 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nop53Q8BK35 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Nop53Q8BK35 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nop53Q8BK35 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nop53Q8BK35 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nop53Q8BK35 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Nop53Q8BK35 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nop53Q8BK35 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Nop53Q8BK35 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Nop53Q8BK35 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.4■□□□□ 0.22
Nop53Q8BK35 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nop53Q8BK35 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nop53Q8BK35 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.4■□□□□ 0.22
Nop53Q8BK35 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.4■□□□□ 0.22
Nop53Q8BK35 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nop53Q8BK35 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nop53Q8BK35 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC16.4■□□□□ 0.22
Nop53Q8BK35 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nop53Q8BK35 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Nop53Q8BK35 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms