Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn3Q8BHH8 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn3Q8BHH8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Clrn3Q8BHH8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn3Q8BHH8 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.4□□□□□ -0.1
Clrn3Q8BHH8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Gm43347-201ENSMUST00000200226 580 ntBASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn3Q8BHH8 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn3Q8BHH8 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn3Q8BHH8 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn3Q8BHH8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn3Q8BHH8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Clrn3Q8BHH8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn3Q8BHH8 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn3Q8BHH8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn3Q8BHH8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn3Q8BHH8 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn3Q8BHH8 Gm8097-201ENSMUST00000117903 829 ntBASIC14.38□□□□□ -0.11
Clrn3Q8BHH8 Gm27459-201ENSMUST00000184860 107 ntBASIC14.38□□□□□ -0.11
Clrn3Q8BHH8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.38□□□□□ -0.11
Clrn3Q8BHH8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.38□□□□□ -0.11
Clrn3Q8BHH8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.38□□□□□ -0.11
Clrn3Q8BHH8 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.38□□□□□ -0.11
Clrn3Q8BHH8 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.38□□□□□ -0.11
Clrn3Q8BHH8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Clrn3Q8BHH8 Gm10819-201ENSMUST00000099988 561 ntBASIC14.38□□□□□ -0.11
Clrn3Q8BHH8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn3Q8BHH8 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn3Q8BHH8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Clrn3Q8BHH8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn3Q8BHH8 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn3Q8BHH8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn3Q8BHH8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Gm7153-201ENSMUST00000117092 455 ntBASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Gm34391-201ENSMUST00000203706 907 ntBASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms