Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Gm6180-201ENSMUST00000065243 498 ntBASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.8□□□□□ -0.36
Ttc28Q80XJ3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Gm29667-201ENSMUST00000190817 490 ntBASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Gm6218-201ENSMUST00000219812 628 ntBASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc28Q80XJ3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ttc28Q80XJ3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ttc28Q80XJ3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Ttc28Q80XJ3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.77□□□□□ -0.37
Ttc28Q80XJ3 Gm44344-201ENSMUST00000200287 129 ntBASIC12.77□□□□□ -0.37
Ttc28Q80XJ3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ttc28Q80XJ3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ttc28Q80XJ3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ttc28Q80XJ3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ttc28Q80XJ3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ttc28Q80XJ3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ttc28Q80XJ3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ttc28Q80XJ3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ttc28Q80XJ3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ttc28Q80XJ3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ttc28Q80XJ3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ttc28Q80XJ3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ttc28Q80XJ3 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ttc28Q80XJ3 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.77□□□□□ -0.37
Ttc28Q80XJ3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.77□□□□□ -0.37
Ttc28Q80XJ3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ttc28Q80XJ3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.76□□□□□ -0.37
Ttc28Q80XJ3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ttc28Q80XJ3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ttc28Q80XJ3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms