Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pif1Q80SX8 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.12□□□□□ -0.15
Pif1Q80SX8 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pif1Q80SX8 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pif1Q80SX8 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pif1Q80SX8 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pif1Q80SX8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Pif1Q80SX8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pif1Q80SX8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pif1Q80SX8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pif1Q80SX8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pif1Q80SX8 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pif1Q80SX8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pif1Q80SX8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.12□□□□□ -0.15
Pif1Q80SX8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pif1Q80SX8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pif1Q80SX8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pif1Q80SX8 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pif1Q80SX8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pif1Q80SX8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.11□□□□□ -0.15
Pif1Q80SX8 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.11□□□□□ -0.15
Pif1Q80SX8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pif1Q80SX8 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.11□□□□□ -0.15
Pif1Q80SX8 Gm18246-201ENSMUST00000221023 728 ntBASIC14.11□□□□□ -0.15
Pif1Q80SX8 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.11□□□□□ -0.15
Pif1Q80SX8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.11□□□□□ -0.15
Pif1Q80SX8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pif1Q80SX8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.1□□□□□ -0.15
Pif1Q80SX8 Gm13365-201ENSMUST00000121188 973 ntBASIC14.1□□□□□ -0.15
Pif1Q80SX8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Pif1Q80SX8 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Gm44335-201ENSMUST00000196879 141 ntBASIC14.1□□□□□ -0.15
Pif1Q80SX8 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.1□□□□□ -0.15
Pif1Q80SX8 Gm44297-201ENSMUST00000198304 141 ntBASIC14.1□□□□□ -0.15
Pif1Q80SX8 Gm44346-201ENSMUST00000198851 141 ntBASIC14.1□□□□□ -0.15
Pif1Q80SX8 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Gm45612-201ENSMUST00000211320 160 ntBASIC14.1□□□□□ -0.15
Pif1Q80SX8 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.1□□□□□ -0.15
Pif1Q80SX8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pif1Q80SX8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms