Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.49□□□□□ -0.41
Vma21Q78T54 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vma21Q78T54 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vma21Q78T54 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vma21Q78T54 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.49□□□□□ -0.41
Vma21Q78T54 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vma21Q78T54 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.49□□□□□ -0.41
Vma21Q78T54 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.49□□□□□ -0.41
Vma21Q78T54 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.49□□□□□ -0.41
Vma21Q78T54 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.49□□□□□ -0.41
Vma21Q78T54 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.49□□□□□ -0.41
Vma21Q78T54 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Vma21Q78T54 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.49□□□□□ -0.41
Vma21Q78T54 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Vma21Q78T54 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.49□□□□□ -0.41
Vma21Q78T54 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.49□□□□□ -0.41
Vma21Q78T54 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.49□□□□□ -0.41
Vma21Q78T54 Gm8825-201ENSMUST00000182565 998 ntBASIC12.49□□□□□ -0.41
Vma21Q78T54 Gm4518-201ENSMUST00000182638 718 ntBASIC12.49□□□□□ -0.41
Vma21Q78T54 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.49□□□□□ -0.41
Vma21Q78T54 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.49□□□□□ -0.41
Vma21Q78T54 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.49□□□□□ -0.41
Vma21Q78T54 Gm9172-201ENSMUST00000212092 954 ntBASIC12.49□□□□□ -0.41
Vma21Q78T54 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.49□□□□□ -0.41
Vma21Q78T54 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.49□□□□□ -0.41
Vma21Q78T54 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Vma21Q78T54 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vma21Q78T54 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vma21Q78T54 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vma21Q78T54 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vma21Q78T54 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vma21Q78T54 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vma21Q78T54 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vma21Q78T54 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vma21Q78T54 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.48□□□□□ -0.41
Vma21Q78T54 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Vma21Q78T54 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.48□□□□□ -0.41
Vma21Q78T54 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vma21Q78T54 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vma21Q78T54 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vma21Q78T54 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Vma21Q78T54 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vma21Q78T54 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Vma21Q78T54 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Vma21Q78T54 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Vma21Q78T54 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vma21Q78T54 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.48□□□□□ -0.41
Vma21Q78T54 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vma21Q78T54 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vma21Q78T54 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.48□□□□□ -0.41
Vma21Q78T54 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Vma21Q78T54 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Vma21Q78T54 Gm29518-201ENSMUST00000190858 372 ntBASIC12.48□□□□□ -0.41
Vma21Q78T54 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vma21Q78T54 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vma21Q78T54 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vma21Q78T54 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vma21Q78T54 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vma21Q78T54 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vma21Q78T54 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.48□□□□□ -0.41
Vma21Q78T54 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vma21Q78T54 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vma21Q78T54 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.48□□□□□ -0.41
Vma21Q78T54 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vma21Q78T54 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vma21Q78T54 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vma21Q78T54 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vma21Q78T54 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vma21Q78T54 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Vma21Q78T54 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vma21Q78T54 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vma21Q78T54 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vma21Q78T54 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.47□□□□□ -0.41
Vma21Q78T54 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vma21Q78T54 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vma21Q78T54 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Vma21Q78T54 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vma21Q78T54 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vma21Q78T54 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vma21Q78T54 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Vma21Q78T54 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.47□□□□□ -0.41
Vma21Q78T54 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vma21Q78T54 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.47□□□□□ -0.41
Vma21Q78T54 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Vma21Q78T54 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.47□□□□□ -0.41
Vma21Q78T54 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vma21Q78T54 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vma21Q78T54 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vma21Q78T54 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vma21Q78T54 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vma21Q78T54 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vma21Q78T54 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.47□□□□□ -0.41
Vma21Q78T54 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vma21Q78T54 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vma21Q78T54 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Vma21Q78T54 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vma21Q78T54 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vma21Q78T54 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vma21Q78T54 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vma21Q78T54 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms