Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx58Q6Q899 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx58Q6Q899 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC18.88■□□□□ 0.61
Ddx58Q6Q899 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.88■□□□□ 0.61
Ddx58Q6Q899 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx58Q6Q899 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Ddx58Q6Q899 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.88■□□□□ 0.61
Ddx58Q6Q899 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx58Q6Q899 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx58Q6Q899 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx58Q6Q899 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx58Q6Q899 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx58Q6Q899 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.88■□□□□ 0.61
Ddx58Q6Q899 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx58Q6Q899 Dancr-204ENSMUST00000132389 2347 ntBASIC18.88■□□□□ 0.61
Ddx58Q6Q899 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx58Q6Q899 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx58Q6Q899 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.87■□□□□ 0.61
Ddx58Q6Q899 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx58Q6Q899 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx58Q6Q899 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC18.87■□□□□ 0.61
Ddx58Q6Q899 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.87■□□□□ 0.61
Ddx58Q6Q899 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Ddx58Q6Q899 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx58Q6Q899 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx58Q6Q899 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx58Q6Q899 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Ddx58Q6Q899 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ddx58Q6Q899 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx58Q6Q899 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx58Q6Q899 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx58Q6Q899 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx58Q6Q899 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx58Q6Q899 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx58Q6Q899 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx58Q6Q899 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx58Q6Q899 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx58Q6Q899 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Ddx58Q6Q899 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx58Q6Q899 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx58Q6Q899 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx58Q6Q899 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ddx58Q6Q899 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx58Q6Q899 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx58Q6Q899 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Ddx58Q6Q899 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.86■□□□□ 0.61
Ddx58Q6Q899 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Ddx58Q6Q899 Gm44335-201ENSMUST00000196879 141 ntBASIC18.86■□□□□ 0.61
Ddx58Q6Q899 Gm44297-201ENSMUST00000198304 141 ntBASIC18.86■□□□□ 0.61
Ddx58Q6Q899 Gm44346-201ENSMUST00000198851 141 ntBASIC18.86■□□□□ 0.61
Ddx58Q6Q899 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.86■□□□□ 0.61
Ddx58Q6Q899 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Ddx58Q6Q899 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx58Q6Q899 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx58Q6Q899 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx58Q6Q899 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx58Q6Q899 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx58Q6Q899 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx58Q6Q899 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.86■□□□□ 0.61
Ddx58Q6Q899 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx58Q6Q899 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.86■□□□□ 0.61
Ddx58Q6Q899 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.85■□□□□ 0.61
Ddx58Q6Q899 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx58Q6Q899 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.85■□□□□ 0.61
Ddx58Q6Q899 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx58Q6Q899 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
Ddx58Q6Q899 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx58Q6Q899 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx58Q6Q899 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx58Q6Q899 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx58Q6Q899 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx58Q6Q899 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx58Q6Q899 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx58Q6Q899 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx58Q6Q899 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms