Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dhx40Q6PE54 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.04■□□□□ 0.32
Dhx40Q6PE54 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Dhx40Q6PE54 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dhx40Q6PE54 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.03■□□□□ 0.32
Dhx40Q6PE54 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dhx40Q6PE54 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dhx40Q6PE54 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dhx40Q6PE54 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dhx40Q6PE54 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dhx40Q6PE54 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dhx40Q6PE54 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Dhx40Q6PE54 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.03■□□□□ 0.32
Dhx40Q6PE54 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dhx40Q6PE54 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dhx40Q6PE54 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Dhx40Q6PE54 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dhx40Q6PE54 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Dhx40Q6PE54 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Dhx40Q6PE54 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dhx40Q6PE54 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dhx40Q6PE54 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Dhx40Q6PE54 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Dhx40Q6PE54 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.02■□□□□ 0.32
Dhx40Q6PE54 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.02■□□□□ 0.32
Dhx40Q6PE54 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Dhx40Q6PE54 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Dhx40Q6PE54 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Dhx40Q6PE54 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Dhx40Q6PE54 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Dhx40Q6PE54 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.02■□□□□ 0.32
Dhx40Q6PE54 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Dhx40Q6PE54 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Dhx40Q6PE54 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Dhx40Q6PE54 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.02■□□□□ 0.32
Dhx40Q6PE54 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Dhx40Q6PE54 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Dhx40Q6PE54 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Dhx40Q6PE54 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Dhx40Q6PE54 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Dhx40Q6PE54 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Dhx40Q6PE54 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Dhx40Q6PE54 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Dhx40Q6PE54 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Dhx40Q6PE54 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Dhx40Q6PE54 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Dhx40Q6PE54 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Dhx40Q6PE54 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms