Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Smarcd3Q6P9Z1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.08□□□□□ -0.16
Smarcd3Q6P9Z1 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Smarcd3Q6P9Z1 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcd3Q6P9Z1 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcd3Q6P9Z1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Smarcd3Q6P9Z1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcd3Q6P9Z1 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.08□□□□□ -0.16
Smarcd3Q6P9Z1 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Smarcd3Q6P9Z1 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Smarcd3Q6P9Z1 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.06□□□□□ -0.16
Smarcd3Q6P9Z1 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd3Q6P9Z1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd3Q6P9Z1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd3Q6P9Z1 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd3Q6P9Z1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd3Q6P9Z1 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd3Q6P9Z1 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd3Q6P9Z1 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Smarcd3Q6P9Z1 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd3Q6P9Z1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd3Q6P9Z1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.06□□□□□ -0.16
Smarcd3Q6P9Z1 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd3Q6P9Z1 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd3Q6P9Z1 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Smarcd3Q6P9Z1 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd3Q6P9Z1 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd3Q6P9Z1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd3Q6P9Z1 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd3Q6P9Z1 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd3Q6P9Z1 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Rprl3-201ENSMUST00000157400 290 ntBASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd3Q6P9Z1 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms