Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rtl3Q6P1Y1 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rtl3Q6P1Y1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Gm8318-201ENSMUST00000182954 872 ntBASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rtl3Q6P1Y1 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Gm23935-201ENSMUST00000102303 57 ntBASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Gm24270-201ENSMUST00000102326 57 ntBASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Gm24245-201ENSMUST00000157318 57 ntBASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Gm4899-201ENSMUST00000178708 719 ntBASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rtl3Q6P1Y1 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Rtl3Q6P1Y1 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtl3Q6P1Y1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtl3Q6P1Y1 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtl3Q6P1Y1 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtl3Q6P1Y1 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.79■□□□□ 0.12
Rtl3Q6P1Y1 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtl3Q6P1Y1 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms