Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Slx4Q6P1D7 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Slx4Q6P1D7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Slx4Q6P1D7 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Slx4Q6P1D7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Slx4Q6P1D7 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Slx4Q6P1D7 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC23.33■■□□□ 1.33
Slx4Q6P1D7 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC23.33■■□□□ 1.33
Slx4Q6P1D7 Gm18018-201ENSMUST00000198273 408 ntBASIC23.33■■□□□ 1.33
Slx4Q6P1D7 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Slx4Q6P1D7 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Slx4Q6P1D7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Slx4Q6P1D7 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Slx4Q6P1D7 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Slx4Q6P1D7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Slx4Q6P1D7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Slx4Q6P1D7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Slx4Q6P1D7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Slx4Q6P1D7 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC23.32■■□□□ 1.32
Slx4Q6P1D7 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC23.32■■□□□ 1.32
Slx4Q6P1D7 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Slx4Q6P1D7 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Slx4Q6P1D7 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Slx4Q6P1D7 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Slx4Q6P1D7 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Slx4Q6P1D7 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Slx4Q6P1D7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Slx4Q6P1D7 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC23.32■■□□□ 1.32
Slx4Q6P1D7 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Slx4Q6P1D7 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Slx4Q6P1D7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Slx4Q6P1D7 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Slx4Q6P1D7 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Slx4Q6P1D7 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Slx4Q6P1D7 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slx4Q6P1D7 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gm15593-201ENSMUST00000122085 1008 ntBASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gm29310-201ENSMUST00000185468 696 ntBASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gm21825-201ENSMUST00000185728 696 ntBASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gm29109-201ENSMUST00000185895 696 ntBASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gm21896-201ENSMUST00000186520 696 ntBASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gm21873-201ENSMUST00000186728 696 ntBASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gm21794-201ENSMUST00000187056 696 ntBASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gm21880-201ENSMUST00000187275 696 ntBASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gm21826-201ENSMUST00000187451 696 ntBASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gm21198-201ENSMUST00000188393 696 ntBASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gm21749-201ENSMUST00000189343 696 ntBASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gm21901-201ENSMUST00000189568 696 ntBASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gm29424-201ENSMUST00000189716 696 ntBASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gm28599-201ENSMUST00000189838 694 ntBASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gm21867-201ENSMUST00000189917 696 ntBASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gm29269-201ENSMUST00000190087 696 ntBASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gm21722-201ENSMUST00000190153 696 ntBASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gm28423-201ENSMUST00000190701 696 ntBASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gm21899-201ENSMUST00000190745 696 ntBASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gm21910-201ENSMUST00000191163 696 ntBASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gm21849-201ENSMUST00000191571 696 ntBASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gm28678-201ENSMUST00000191593 696 ntBASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gm20910-201ENSMUST00000193268 696 ntBASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gm21871-201ENSMUST00000194621 696 ntBASIC23.31■■□□□ 1.32
Slx4Q6P1D7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Slx4Q6P1D7 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Gm9899-201ENSMUST00000065519 555 ntBASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slx4Q6P1D7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Slx4Q6P1D7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Slx4Q6P1D7 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Slx4Q6P1D7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Slx4Q6P1D7 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Slx4Q6P1D7 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Slx4Q6P1D7 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Slx4Q6P1D7 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Slx4Q6P1D7 Gm3436-201ENSMUST00000179930 840 ntBASIC23.3■■□□□ 1.32
Slx4Q6P1D7 Gm9908-201ENSMUST00000211534 448 ntBASIC23.3■■□□□ 1.32
Slx4Q6P1D7 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Slx4Q6P1D7 Gm16476-201ENSMUST00000221544 139 ntBASIC23.3■■□□□ 1.32
Slx4Q6P1D7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Slx4Q6P1D7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Slx4Q6P1D7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Slx4Q6P1D7 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Slx4Q6P1D7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Slx4Q6P1D7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC23.29■■□□□ 1.32
Slx4Q6P1D7 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Slx4Q6P1D7 Gm11478-201ENSMUST00000117851 599 ntBASIC23.29■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms