Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.12■□□□□ 0.33
Hdac4Q6NZM9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac4Q6NZM9 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.12■□□□□ 0.33
Hdac4Q6NZM9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Hdac4Q6NZM9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac4Q6NZM9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Hdac4Q6NZM9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Hdac4Q6NZM9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac4Q6NZM9 Gm15173-201ENSMUST00000122049 433 ntBASIC17.12■□□□□ 0.33
Hdac4Q6NZM9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac4Q6NZM9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.12■□□□□ 0.33
Hdac4Q6NZM9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.12■□□□□ 0.33
Hdac4Q6NZM9 Gm9682-201ENSMUST00000197505 556 ntBASIC17.12■□□□□ 0.33
Hdac4Q6NZM9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.12■□□□□ 0.33
Hdac4Q6NZM9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac4Q6NZM9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac4Q6NZM9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac4Q6NZM9 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac4Q6NZM9 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Hdac4Q6NZM9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac4Q6NZM9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac4Q6NZM9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac4Q6NZM9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Hdac4Q6NZM9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Hdac4Q6NZM9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.11■□□□□ 0.33
Hdac4Q6NZM9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Celf4-206ENSMUST00000224553 1729 ntBASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Gm6550-201ENSMUST00000187574 993 ntBASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac4Q6NZM9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.09■□□□□ 0.33
Hdac4Q6NZM9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
Hdac4Q6NZM9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac4Q6NZM9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hdac4Q6NZM9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.09■□□□□ 0.33
Hdac4Q6NZM9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac4Q6NZM9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Hdac4Q6NZM9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac4Q6NZM9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac4Q6NZM9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hdac4Q6NZM9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac4Q6NZM9 Gm11764-201ENSMUST00000120221 623 ntBASIC17.09■□□□□ 0.33
Hdac4Q6NZM9 Gm11452-201ENSMUST00000122376 690 ntBASIC17.09■□□□□ 0.33
Hdac4Q6NZM9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.09■□□□□ 0.33
Hdac4Q6NZM9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac4Q6NZM9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac4Q6NZM9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Hdac4Q6NZM9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.09■□□□□ 0.33
Hdac4Q6NZM9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac4Q6NZM9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac4Q6NZM9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms