Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf6Q6NVF9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 Gm14722-201ENSMUST00000118943 689 ntBASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf6Q6NVF9 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf6Q6NVF9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms