Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Scube3Q66PY1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Scube3Q66PY1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scube3Q66PY1 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scube3Q66PY1 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Scube3Q66PY1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.08■□□□□ 0.16
Scube3Q66PY1 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.08■□□□□ 0.16
Scube3Q66PY1 Gm10499-201ENSMUST00000174094 934 ntBASIC16.08■□□□□ 0.16
Scube3Q66PY1 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Scube3Q66PY1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.08■□□□□ 0.16
Scube3Q66PY1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Scube3Q66PY1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scube3Q66PY1 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scube3Q66PY1 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scube3Q66PY1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.08■□□□□ 0.16
Scube3Q66PY1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.08■□□□□ 0.16
Scube3Q66PY1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scube3Q66PY1 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scube3Q66PY1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.07■□□□□ 0.16
Scube3Q66PY1 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scube3Q66PY1 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Scube3Q66PY1 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Scube3Q66PY1 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scube3Q66PY1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Scube3Q66PY1 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scube3Q66PY1 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.07■□□□□ 0.16
Scube3Q66PY1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Scube3Q66PY1 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Scube3Q66PY1 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scube3Q66PY1 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scube3Q66PY1 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Scube3Q66PY1 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Scube3Q66PY1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Scube3Q66PY1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scube3Q66PY1 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Scube3Q66PY1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scube3Q66PY1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Scube3Q66PY1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Scube3Q66PY1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scube3Q66PY1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scube3Q66PY1 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.06■□□□□ 0.16
Scube3Q66PY1 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scube3Q66PY1 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Scube3Q66PY1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scube3Q66PY1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Scube3Q66PY1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scube3Q66PY1 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scube3Q66PY1 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scube3Q66PY1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
Scube3Q66PY1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.06■□□□□ 0.16
Scube3Q66PY1 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.06■□□□□ 0.16
Scube3Q66PY1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scube3Q66PY1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scube3Q66PY1 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scube3Q66PY1 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scube3Q66PY1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Scube3Q66PY1 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scube3Q66PY1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scube3Q66PY1 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scube3Q66PY1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Scube3Q66PY1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scube3Q66PY1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scube3Q66PY1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scube3Q66PY1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Scube3Q66PY1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scube3Q66PY1 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scube3Q66PY1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scube3Q66PY1 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scube3Q66PY1 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Scube3Q66PY1 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scube3Q66PY1 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scube3Q66PY1 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.05■□□□□ 0.16
Scube3Q66PY1 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scube3Q66PY1 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.05■□□□□ 0.16
Scube3Q66PY1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Scube3Q66PY1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scube3Q66PY1 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scube3Q66PY1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scube3Q66PY1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Scube3Q66PY1 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scube3Q66PY1 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scube3Q66PY1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scube3Q66PY1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scube3Q66PY1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scube3Q66PY1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scube3Q66PY1 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scube3Q66PY1 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scube3Q66PY1 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scube3Q66PY1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scube3Q66PY1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scube3Q66PY1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scube3Q66PY1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scube3Q66PY1 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scube3Q66PY1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Scube3Q66PY1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
Scube3Q66PY1 Gm9727-201ENSMUST00000161387 555 ntBASIC16.04■□□□□ 0.16
Scube3Q66PY1 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.04■□□□□ 0.16
Scube3Q66PY1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scube3Q66PY1 AC132260.2-201ENSMUST00000224482 344 ntBASIC16.04■□□□□ 0.16
Scube3Q66PY1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms