Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.49□□□□□ -0.41
Col7a1Q63870 Mir5132-201ENSMUST00000175166 71 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col7a1Q63870 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Col7a1Q63870 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col7a1Q63870 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.49□□□□□ -0.41
Col7a1Q63870 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col7a1Q63870 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.49□□□□□ -0.41
Col7a1Q63870 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col7a1Q63870 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Col7a1Q63870 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.49□□□□□ -0.41
Col7a1Q63870 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col7a1Q63870 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col7a1Q63870 Gm12384-201ENSMUST00000119228 919 ntBASIC12.48□□□□□ -0.41
Col7a1Q63870 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col7a1Q63870 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col7a1Q63870 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.48□□□□□ -0.41
Col7a1Q63870 AU022133-201ENSMUST00000200601 873 ntBASIC12.48□□□□□ -0.41
Col7a1Q63870 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.48□□□□□ -0.41
Col7a1Q63870 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col7a1Q63870 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col7a1Q63870 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col7a1Q63870 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Col7a1Q63870 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col7a1Q63870 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col7a1Q63870 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col7a1Q63870 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Col7a1Q63870 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.48□□□□□ -0.41
Col7a1Q63870 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.48□□□□□ -0.41
Col7a1Q63870 Mir7654-201ENSMUST00000185082 70 ntBASIC12.48□□□□□ -0.41
Col7a1Q63870 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col7a1Q63870 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col7a1Q63870 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col7a1Q63870 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.48□□□□□ -0.41
Col7a1Q63870 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.48□□□□□ -0.41
Col7a1Q63870 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.48□□□□□ -0.41
Col7a1Q63870 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.48□□□□□ -0.41
Col7a1Q63870 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Col7a1Q63870 Gm3961-201ENSMUST00000204425 994 ntBASIC12.48□□□□□ -0.41
Col7a1Q63870 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col7a1Q63870 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col7a1Q63870 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Col7a1Q63870 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col7a1Q63870 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col7a1Q63870 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col7a1Q63870 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col7a1Q63870 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col7a1Q63870 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col7a1Q63870 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.47□□□□□ -0.41
Col7a1Q63870 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col7a1Q63870 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col7a1Q63870 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col7a1Q63870 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col7a1Q63870 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col7a1Q63870 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Col7a1Q63870 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Col7a1Q63870 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col7a1Q63870 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Col7a1Q63870 Gm11814-201ENSMUST00000119515 929 ntBASIC12.47□□□□□ -0.41
Col7a1Q63870 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.47□□□□□ -0.41
Col7a1Q63870 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.47□□□□□ -0.41
Col7a1Q63870 Gm45930-201ENSMUST00000221330 292 ntBASIC12.47□□□□□ -0.41
Col7a1Q63870 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.47□□□□□ -0.41
Col7a1Q63870 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col7a1Q63870 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col7a1Q63870 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col7a1Q63870 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col7a1Q63870 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col7a1Q63870 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Col7a1Q63870 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col7a1Q63870 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Col7a1Q63870 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col7a1Q63870 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col7a1Q63870 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.47□□□□□ -0.41
Col7a1Q63870 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.47□□□□□ -0.41
Col7a1Q63870 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.47□□□□□ -0.41
Col7a1Q63870 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.47□□□□□ -0.41
Col7a1Q63870 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.47□□□□□ -0.41
Col7a1Q63870 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col7a1Q63870 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col7a1Q63870 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Col7a1Q63870 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col7a1Q63870 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col7a1Q63870 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col7a1Q63870 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col7a1Q63870 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC12.46□□□□□ -0.41
Col7a1Q63870 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col7a1Q63870 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col7a1Q63870 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.46□□□□□ -0.41
Col7a1Q63870 Gm45453-201ENSMUST00000211758 853 ntBASIC12.46□□□□□ -0.41
Col7a1Q63870 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.46□□□□□ -0.41
Col7a1Q63870 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.46□□□□□ -0.41
Col7a1Q63870 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col7a1Q63870 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.46□□□□□ -0.41
Col7a1Q63870 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col7a1Q63870 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col7a1Q63870 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.42
Col7a1Q63870 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Col7a1Q63870 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms