Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
AtmQ62388 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AtmQ62388 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AtmQ62388 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.32□□□□□ -0.12
AtmQ62388 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AtmQ62388 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.32□□□□□ -0.12
AtmQ62388 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
AtmQ62388 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AtmQ62388 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
AtmQ62388 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AtmQ62388 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
AtmQ62388 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.31□□□□□ -0.12
AtmQ62388 Gm42693-201ENSMUST00000196779 631 ntBASIC14.31□□□□□ -0.12
AtmQ62388 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AtmQ62388 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.31□□□□□ -0.12
AtmQ62388 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AtmQ62388 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
AtmQ62388 Gm13226-201ENSMUST00000117838 404 ntBASIC14.31□□□□□ -0.12
AtmQ62388 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.31□□□□□ -0.12
AtmQ62388 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
AtmQ62388 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.31□□□□□ -0.12
AtmQ62388 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AtmQ62388 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
AtmQ62388 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AtmQ62388 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.31□□□□□ -0.12
AtmQ62388 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AtmQ62388 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
AtmQ62388 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AtmQ62388 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AtmQ62388 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AtmQ62388 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AtmQ62388 Gm12957-201ENSMUST00000117835 377 ntBASIC14.3□□□□□ -0.12
AtmQ62388 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.3□□□□□ -0.12
AtmQ62388 Gm12176-201ENSMUST00000121420 875 ntBASIC14.3□□□□□ -0.12
AtmQ62388 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
AtmQ62388 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AtmQ62388 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AtmQ62388 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AtmQ62388 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AtmQ62388 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
AtmQ62388 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
AtmQ62388 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AtmQ62388 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AtmQ62388 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.3□□□□□ -0.12
AtmQ62388 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AtmQ62388 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.3□□□□□ -0.12
AtmQ62388 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AtmQ62388 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AtmQ62388 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AtmQ62388 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AtmQ62388 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AtmQ62388 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AtmQ62388 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
AtmQ62388 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AtmQ62388 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
AtmQ62388 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AtmQ62388 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.3□□□□□ -0.12
AtmQ62388 Gm11543-201ENSMUST00000120758 370 ntBASIC14.3□□□□□ -0.12
AtmQ62388 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.3□□□□□ -0.12
AtmQ62388 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.3□□□□□ -0.12
AtmQ62388 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
AtmQ62388 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AtmQ62388 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
AtmQ62388 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AtmQ62388 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AtmQ62388 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AtmQ62388 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AtmQ62388 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
AtmQ62388 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AtmQ62388 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AtmQ62388 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AtmQ62388 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.29□□□□□ -0.12
AtmQ62388 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AtmQ62388 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AtmQ62388 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AtmQ62388 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.29□□□□□ -0.12
AtmQ62388 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
AtmQ62388 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
AtmQ62388 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.29□□□□□ -0.12
AtmQ62388 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
AtmQ62388 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
AtmQ62388 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AtmQ62388 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AtmQ62388 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.29□□□□□ -0.12
AtmQ62388 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
AtmQ62388 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AtmQ62388 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
AtmQ62388 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
AtmQ62388 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
AtmQ62388 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AtmQ62388 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AtmQ62388 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AtmQ62388 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AtmQ62388 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
AtmQ62388 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.29□□□□□ -0.12
AtmQ62388 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
AtmQ62388 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AtmQ62388 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AtmQ62388 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.28□□□□□ -0.12
AtmQ62388 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms