Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six3Q62233 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six3Q62233 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six3Q62233 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Six3Q62233 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six3Q62233 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six3Q62233 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Six3Q62233 Gm8344-201ENSMUST00000119813 856 ntBASIC14.98□□□□□ -0.01
Six3Q62233 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.98□□□□□ -0.01
Six3Q62233 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.98□□□□□ -0.01
Six3Q62233 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Six3Q62233 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Six3Q62233 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.98□□□□□ -0.01
Six3Q62233 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Six3Q62233 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.98□□□□□ -0.01
Six3Q62233 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six3Q62233 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six3Q62233 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Six3Q62233 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.98□□□□□ -0.01
Six3Q62233 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six3Q62233 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six3Q62233 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.98□□□□□ -0.01
Six3Q62233 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six3Q62233 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.98□□□□□ -0.01
Six3Q62233 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six3Q62233 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Six3Q62233 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six3Q62233 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Six3Q62233 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Six3Q62233 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six3Q62233 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Six3Q62233 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.97□□□□□ -0.01
Six3Q62233 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six3Q62233 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.97□□□□□ -0.01
Six3Q62233 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six3Q62233 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six3Q62233 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six3Q62233 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six3Q62233 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six3Q62233 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six3Q62233 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Six3Q62233 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.97□□□□□ -0.01
Six3Q62233 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.97□□□□□ -0.01
Six3Q62233 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Six3Q62233 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.97□□□□□ -0.01
Six3Q62233 Gm8655-201ENSMUST00000221159 852 ntBASIC14.97□□□□□ -0.01
Six3Q62233 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six3Q62233 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six3Q62233 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six3Q62233 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six3Q62233 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six3Q62233 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Six3Q62233 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six3Q62233 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six3Q62233 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Six3Q62233 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six3Q62233 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six3Q62233 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Six3Q62233 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six3Q62233 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six3Q62233 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six3Q62233 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six3Q62233 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Six3Q62233 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Six3Q62233 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Six3Q62233 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six3Q62233 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.96□□□□□ -0.01
Six3Q62233 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six3Q62233 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Six3Q62233 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six3Q62233 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six3Q62233 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.96□□□□□ -0.01
Six3Q62233 Gm8097-201ENSMUST00000117903 829 ntBASIC14.96□□□□□ -0.01
Six3Q62233 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six3Q62233 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six3Q62233 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.96□□□□□ -0.01
Six3Q62233 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Six3Q62233 Gm17807-201ENSMUST00000186869 298 ntBASIC14.96□□□□□ -0.01
Six3Q62233 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.96□□□□□ -0.01
Six3Q62233 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.96□□□□□ -0.01
Six3Q62233 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six3Q62233 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Six3Q62233 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six3Q62233 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six3Q62233 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six3Q62233 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Six3Q62233 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six3Q62233 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.96□□□□□ -0.01
Six3Q62233 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six3Q62233 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six3Q62233 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six3Q62233 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.96□□□□□ -0.02
Six3Q62233 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Six3Q62233 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Six3Q62233 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.96□□□□□ -0.02
Six3Q62233 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Six3Q62233 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Six3Q62233 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.95□□□□□ -0.02
Six3Q62233 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Six3Q62233 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms