Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Notch3Q61982 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Notch3Q61982 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Notch3Q61982 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Notch3Q61982 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Notch3Q61982 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Notch3Q61982 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Notch3Q61982 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Notch3Q61982 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Notch3Q61982 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Notch3Q61982 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Notch3Q61982 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Notch3Q61982 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Notch3Q61982 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Notch3Q61982 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Notch3Q61982 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 AA543401-201ENSMUST00000164248 1269 ntBASIC11.78□□□□□ -0.52
Notch3Q61982 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Gm17968-201ENSMUST00000194902 784 ntBASIC11.78□□□□□ -0.52
Notch3Q61982 Gm45747-201ENSMUST00000212203 999 ntBASIC11.78□□□□□ -0.52
Notch3Q61982 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.78□□□□□ -0.52
Notch3Q61982 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Notch3Q61982 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC11.78□□□□□ -0.52
Notch3Q61982 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Notch3Q61982 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Notch3Q61982 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Notch3Q61982 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Notch3Q61982 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Gm16401-202ENSMUST00000197463 2074 ntBASIC11.78□□□□□ -0.52
Notch3Q61982 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Gm4899-201ENSMUST00000178708 719 ntBASIC11.78□□□□□ -0.52
Notch3Q61982 Gm27300-201ENSMUST00000184085 97 ntBASIC11.78□□□□□ -0.52
Notch3Q61982 Gm27335-201ENSMUST00000184758 97 ntBASIC11.78□□□□□ -0.52
Notch3Q61982 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Notch3Q61982 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Gm18622-201ENSMUST00000219361 595 ntBASIC11.78□□□□□ -0.52
Notch3Q61982 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.78□□□□□ -0.52
Notch3Q61982 Gm8396-201ENSMUST00000057361 823 ntBASIC11.78□□□□□ -0.52
Notch3Q61982 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Notch3Q61982 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Notch3Q61982 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Notch3Q61982 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.77□□□□□ -0.52
Notch3Q61982 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Notch3Q61982 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Notch3Q61982 Mir6956-201ENSMUST00000183598 62 ntBASIC11.77□□□□□ -0.52
Notch3Q61982 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.77□□□□□ -0.52
Notch3Q61982 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Notch3Q61982 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Notch3Q61982 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Notch3Q61982 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Notch3Q61982 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Notch3Q61982 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Notch3Q61982 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Notch3Q61982 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Notch3Q61982 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Notch3Q61982 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Notch3Q61982 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Notch3Q61982 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Notch3Q61982 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Notch3Q61982 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Notch3Q61982 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Notch3Q61982 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Notch3Q61982 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Notch3Q61982 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Notch3Q61982 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Notch3Q61982 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Notch3Q61982 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Notch3Q61982 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Notch3Q61982 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
Notch3Q61982 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.77□□□□□ -0.53
Notch3Q61982 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Notch3Q61982 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Notch3Q61982 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Notch3Q61982 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms