Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gli3Q61602 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gli3Q61602 Mir8109-201ENSMUST00000184375 117 ntBASIC20.41■□□□□ 0.86
Gli3Q61602 Gm18054-201ENSMUST00000207539 555 ntBASIC20.41■□□□□ 0.86
Gli3Q61602 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC20.41■□□□□ 0.86
Gli3Q61602 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gli3Q61602 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Gli3Q61602 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Gli3Q61602 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gli3Q61602 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Gli3Q61602 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gli3Q61602 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gli3Q61602 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.4■□□□□ 0.86
Gli3Q61602 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gli3Q61602 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Gli3Q61602 Gm37466-201ENSMUST00000195692 652 ntBASIC20.4■□□□□ 0.86
Gli3Q61602 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gli3Q61602 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC20.4■□□□□ 0.86
Gli3Q61602 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Gli3Q61602 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.39■□□□□ 0.86
Gli3Q61602 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC20.39■□□□□ 0.86
Gli3Q61602 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gli3Q61602 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Gli3Q61602 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Gli3Q61602 Gm38230-201ENSMUST00000193572 1159 ntBASIC20.39■□□□□ 0.85
Gli3Q61602 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gli3Q61602 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gli3Q61602 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC20.39■□□□□ 0.85
Gli3Q61602 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gli3Q61602 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gli3Q61602 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gli3Q61602 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gli3Q61602 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gli3Q61602 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gli3Q61602 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gli3Q61602 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Gli3Q61602 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gli3Q61602 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC20.38■□□□□ 0.85
Gli3Q61602 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC20.38■□□□□ 0.85
Gli3Q61602 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC20.38■□□□□ 0.85
Gli3Q61602 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC20.38■□□□□ 0.85
Gli3Q61602 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC20.38■□□□□ 0.85
Gli3Q61602 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Gli3Q61602 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gli3Q61602 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC20.38■□□□□ 0.85
Gli3Q61602 Gm9816-201ENSMUST00000122292 1414 ntBASIC20.38■□□□□ 0.85
Gli3Q61602 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gli3Q61602 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gli3Q61602 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gli3Q61602 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gli3Q61602 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.38■□□□□ 0.85
Gli3Q61602 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gli3Q61602 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gli3Q61602 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gli3Q61602 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gli3Q61602 Gm17794-201ENSMUST00000220252 955 ntBASIC20.38■□□□□ 0.85
Gli3Q61602 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Gli3Q61602 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gli3Q61602 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC20.37■□□□□ 0.85
Gli3Q61602 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gli3Q61602 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gli3Q61602 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gli3Q61602 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gli3Q61602 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Gli3Q61602 Gm10327-201ENSMUST00000105222 1002 ntBASIC20.37■□□□□ 0.85
Gli3Q61602 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC20.37■□□□□ 0.85
Gli3Q61602 Mup-ps23-201ENSMUST00000118063 630 ntBASIC20.37■□□□□ 0.85
Gli3Q61602 Gm12176-201ENSMUST00000121420 875 ntBASIC20.37■□□□□ 0.85
Gli3Q61602 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC20.37■□□□□ 0.85
Gli3Q61602 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Gli3Q61602 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Gli3Q61602 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC20.37■□□□□ 0.85
Gli3Q61602 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC20.37■□□□□ 0.85
Gli3Q61602 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Gli3Q61602 Gm7446-201ENSMUST00000221035 1240 ntBASIC20.37■□□□□ 0.85
Gli3Q61602 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC20.37■□□□□ 0.85
Gli3Q61602 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gli3Q61602 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Gli3Q61602 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gli3Q61602 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gli3Q61602 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gli3Q61602 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Gli3Q61602 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gli3Q61602 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC20.36■□□□□ 0.85
Gli3Q61602 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gli3Q61602 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gli3Q61602 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gli3Q61602 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC20.36■□□□□ 0.85
Gli3Q61602 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC20.36■□□□□ 0.85
Gli3Q61602 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gli3Q61602 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gli3Q61602 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gli3Q61602 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gli3Q61602 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gli3Q61602 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gli3Q61602 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gli3Q61602 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gli3Q61602 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC20.35■□□□□ 0.85
Gli3Q61602 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Gli3Q61602 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms