Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Foxd1Q61345 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Foxd1Q61345 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.65■□□□□ 0.42
Foxd1Q61345 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxd1Q61345 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxd1Q61345 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Foxd1Q61345 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Foxd1Q61345 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxd1Q61345 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Foxd1Q61345 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxd1Q61345 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Foxd1Q61345 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Foxd1Q61345 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxd1Q61345 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Foxd1Q61345 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Foxd1Q61345 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
Foxd1Q61345 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Foxd1Q61345 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxd1Q61345 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.64■□□□□ 0.41
Foxd1Q61345 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
Foxd1Q61345 Gm4899-201ENSMUST00000178708 719 ntBASIC17.64■□□□□ 0.41
Foxd1Q61345 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Foxd1Q61345 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Foxd1Q61345 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxd1Q61345 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxd1Q61345 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxd1Q61345 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxd1Q61345 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Foxd1Q61345 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxd1Q61345 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Foxd1Q61345 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxd1Q61345 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxd1Q61345 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxd1Q61345 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxd1Q61345 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxd1Q61345 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Foxd1Q61345 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxd1Q61345 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd1Q61345 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd1Q61345 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.63■□□□□ 0.41
Foxd1Q61345 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd1Q61345 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd1Q61345 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd1Q61345 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd1Q61345 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd1Q61345 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd1Q61345 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd1Q61345 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd1Q61345 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd1Q61345 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd1Q61345 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC17.63■□□□□ 0.41
Foxd1Q61345 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd1Q61345 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd1Q61345 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd1Q61345 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd1Q61345 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd1Q61345 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd1Q61345 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd1Q61345 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd1Q61345 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Foxd1Q61345 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd1Q61345 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd1Q61345 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd1Q61345 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd1Q61345 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Foxd1Q61345 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd1Q61345 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Foxd1Q61345 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Foxd1Q61345 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.62■□□□□ 0.41
Foxd1Q61345 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Foxd1Q61345 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Foxd1Q61345 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.62■□□□□ 0.41
Foxd1Q61345 Gm12859-201ENSMUST00000117834 427 ntBASIC17.62■□□□□ 0.41
Foxd1Q61345 Gm13223-201ENSMUST00000118609 747 ntBASIC17.62■□□□□ 0.41
Foxd1Q61345 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC17.62■□□□□ 0.41
Foxd1Q61345 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.62■□□□□ 0.41
Foxd1Q61345 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Foxd1Q61345 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Foxd1Q61345 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Foxd1Q61345 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Foxd1Q61345 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Foxd1Q61345 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Foxd1Q61345 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Foxd1Q61345 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.62■□□□□ 0.41
Foxd1Q61345 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Foxd1Q61345 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Foxd1Q61345 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Foxd1Q61345 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.62■□□□□ 0.41
Foxd1Q61345 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Foxd1Q61345 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Foxd1Q61345 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxd1Q61345 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxd1Q61345 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxd1Q61345 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Foxd1Q61345 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxd1Q61345 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.61■□□□□ 0.41
Foxd1Q61345 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxd1Q61345 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxd1Q61345 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Foxd1Q61345 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms