Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clns1aQ61189 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.13□□□□□ -0.31
Clns1aQ61189 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.13□□□□□ -0.31
Clns1aQ61189 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.13□□□□□ -0.31
Clns1aQ61189 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clns1aQ61189 Gm10566-201ENSMUST00000086739 996 ntBASIC13.13□□□□□ -0.31
Clns1aQ61189 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clns1aQ61189 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clns1aQ61189 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clns1aQ61189 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clns1aQ61189 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clns1aQ61189 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Clns1aQ61189 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clns1aQ61189 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Clns1aQ61189 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.13□□□□□ -0.31
Clns1aQ61189 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Clns1aQ61189 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clns1aQ61189 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Clns1aQ61189 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clns1aQ61189 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Clns1aQ61189 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clns1aQ61189 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Clns1aQ61189 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Clns1aQ61189 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clns1aQ61189 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.12□□□□□ -0.31
Clns1aQ61189 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clns1aQ61189 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clns1aQ61189 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clns1aQ61189 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clns1aQ61189 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clns1aQ61189 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Clns1aQ61189 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.12□□□□□ -0.31
Clns1aQ61189 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clns1aQ61189 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clns1aQ61189 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clns1aQ61189 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Clns1aQ61189 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.12□□□□□ -0.31
Clns1aQ61189 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Clns1aQ61189 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clns1aQ61189 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.12□□□□□ -0.31
Clns1aQ61189 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clns1aQ61189 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clns1aQ61189 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clns1aQ61189 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clns1aQ61189 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clns1aQ61189 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.12□□□□□ -0.31
Clns1aQ61189 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clns1aQ61189 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Clns1aQ61189 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clns1aQ61189 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Clns1aQ61189 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Clns1aQ61189 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Clns1aQ61189 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Clns1aQ61189 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clns1aQ61189 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clns1aQ61189 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clns1aQ61189 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clns1aQ61189 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clns1aQ61189 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clns1aQ61189 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clns1aQ61189 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clns1aQ61189 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clns1aQ61189 Gm715-201ENSMUST00000117865 831 ntBASIC13.11□□□□□ -0.31
Clns1aQ61189 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clns1aQ61189 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Clns1aQ61189 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Clns1aQ61189 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clns1aQ61189 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clns1aQ61189 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Clns1aQ61189 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.11□□□□□ -0.31
Clns1aQ61189 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clns1aQ61189 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clns1aQ61189 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Clns1aQ61189 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clns1aQ61189 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.1□□□□□ -0.31
Clns1aQ61189 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clns1aQ61189 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clns1aQ61189 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clns1aQ61189 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clns1aQ61189 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clns1aQ61189 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clns1aQ61189 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clns1aQ61189 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clns1aQ61189 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clns1aQ61189 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.1□□□□□ -0.31
Clns1aQ61189 Gm12134-201ENSMUST00000122109 520 ntBASIC13.1□□□□□ -0.31
Clns1aQ61189 Gm16061-201ENSMUST00000122167 857 ntBASIC13.1□□□□□ -0.31
Clns1aQ61189 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Clns1aQ61189 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clns1aQ61189 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Clns1aQ61189 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clns1aQ61189 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Clns1aQ61189 Gm2274-201ENSMUST00000184539 609 ntBASIC13.1□□□□□ -0.31
Clns1aQ61189 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.1□□□□□ -0.31
Clns1aQ61189 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.1□□□□□ -0.31
Clns1aQ61189 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.1□□□□□ -0.31
Clns1aQ61189 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clns1aQ61189 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clns1aQ61189 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clns1aQ61189 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms