Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.98■□□□□ 0.63
Irf9Q61179 Gm8396-201ENSMUST00000057361 823 ntBASIC18.98■□□□□ 0.63
Irf9Q61179 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Irf9Q61179 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Irf9Q61179 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Irf9Q61179 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Irf9Q61179 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Irf9Q61179 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Irf9Q61179 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Irf9Q61179 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Irf9Q61179 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Irf9Q61179 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Irf9Q61179 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Irf9Q61179 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Irf9Q61179 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Irf9Q61179 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Irf9Q61179 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Irf9Q61179 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Irf9Q61179 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.97■□□□□ 0.63
Irf9Q61179 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Irf9Q61179 Gm44335-201ENSMUST00000196879 141 ntBASIC18.97■□□□□ 0.63
Irf9Q61179 Gm44297-201ENSMUST00000198304 141 ntBASIC18.97■□□□□ 0.63
Irf9Q61179 Gm44346-201ENSMUST00000198851 141 ntBASIC18.97■□□□□ 0.63
Irf9Q61179 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.97■□□□□ 0.63
Irf9Q61179 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.97■□□□□ 0.63
Irf9Q61179 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Irf9Q61179 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Irf9Q61179 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Irf9Q61179 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Irf9Q61179 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Irf9Q61179 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Irf9Q61179 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
Irf9Q61179 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Irf9Q61179 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Irf9Q61179 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.97■□□□□ 0.63
Irf9Q61179 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.97■□□□□ 0.63
Irf9Q61179 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Irf9Q61179 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Irf9Q61179 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Irf9Q61179 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.96■□□□□ 0.63
Irf9Q61179 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Irf9Q61179 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Irf9Q61179 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Irf9Q61179 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Irf9Q61179 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Irf9Q61179 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Irf9Q61179 Rprl2-201ENSMUST00000157150 290 ntBASIC18.96■□□□□ 0.63
Irf9Q61179 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Irf9Q61179 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Irf9Q61179 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC18.96■□□□□ 0.63
Irf9Q61179 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.96■□□□□ 0.63
Irf9Q61179 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Irf9Q61179 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Irf9Q61179 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.96■□□□□ 0.63
Irf9Q61179 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Irf9Q61179 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Irf9Q61179 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Irf9Q61179 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.96■□□□□ 0.63
Irf9Q61179 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Irf9Q61179 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Irf9Q61179 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Irf9Q61179 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Irf9Q61179 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Irf9Q61179 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Irf9Q61179 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Irf9Q61179 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Irf9Q61179 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.95■□□□□ 0.62
Irf9Q61179 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Irf9Q61179 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Irf9Q61179 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.95■□□□□ 0.62
Irf9Q61179 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Irf9Q61179 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Irf9Q61179 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC18.95■□□□□ 0.62
Irf9Q61179 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.95■□□□□ 0.62
Irf9Q61179 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Irf9Q61179 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Irf9Q61179 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Irf9Q61179 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Irf9Q61179 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Irf9Q61179 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irf9Q61179 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irf9Q61179 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irf9Q61179 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irf9Q61179 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irf9Q61179 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irf9Q61179 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irf9Q61179 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irf9Q61179 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.94■□□□□ 0.62
Irf9Q61179 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irf9Q61179 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC18.94■□□□□ 0.62
Irf9Q61179 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.94■□□□□ 0.62
Irf9Q61179 Gm18889-201ENSMUST00000174284 929 ntBASIC18.94■□□□□ 0.62
Irf9Q61179 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.94■□□□□ 0.62
Irf9Q61179 AC164567.1-201ENSMUST00000219185 960 ntBASIC18.94■□□□□ 0.62
Irf9Q61179 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC18.94■□□□□ 0.62
Irf9Q61179 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Irf9Q61179 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irf9Q61179 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irf9Q61179 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irf9Q61179 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms