Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfaip3Q60769 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfaip3Q60769 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfaip3Q60769 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfaip3Q60769 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.4□□□□□ -0.1
Tnfaip3Q60769 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfaip3Q60769 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Tnfaip3Q60769 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Tnfaip3Q60769 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.4□□□□□ -0.1
Tnfaip3Q60769 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Tnfaip3Q60769 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Tnfaip3Q60769 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.4□□□□□ -0.1
Tnfaip3Q60769 Gm8318-201ENSMUST00000182954 872 ntBASIC14.4□□□□□ -0.1
Tnfaip3Q60769 Gm5264-201ENSMUST00000190584 848 ntBASIC14.4□□□□□ -0.1
Tnfaip3Q60769 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfaip3Q60769 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfaip3Q60769 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfaip3Q60769 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfaip3Q60769 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfaip3Q60769 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfaip3Q60769 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.4□□□□□ -0.1
Tnfaip3Q60769 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfaip3Q60769 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfaip3Q60769 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfaip3Q60769 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfaip3Q60769 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfaip3Q60769 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfaip3Q60769 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfaip3Q60769 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfaip3Q60769 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfaip3Q60769 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Tnfaip3Q60769 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfaip3Q60769 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.39□□□□□ -0.11
Tnfaip3Q60769 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfaip3Q60769 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfaip3Q60769 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfaip3Q60769 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Tnfaip3Q60769 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Tnfaip3Q60769 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfaip3Q60769 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.39□□□□□ -0.11
Tnfaip3Q60769 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfaip3Q60769 Gm27300-201ENSMUST00000184085 97 ntBASIC14.39□□□□□ -0.11
Tnfaip3Q60769 Gm27335-201ENSMUST00000184758 97 ntBASIC14.39□□□□□ -0.11
Tnfaip3Q60769 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfaip3Q60769 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.39□□□□□ -0.11
Tnfaip3Q60769 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfaip3Q60769 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfaip3Q60769 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfaip3Q60769 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Tnfaip3Q60769 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfaip3Q60769 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfaip3Q60769 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfaip3Q60769 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfaip3Q60769 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfaip3Q60769 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfaip3Q60769 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tnfaip3Q60769 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfaip3Q60769 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfaip3Q60769 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tnfaip3Q60769 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tnfaip3Q60769 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfaip3Q60769 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfaip3Q60769 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfaip3Q60769 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfaip3Q60769 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfaip3Q60769 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfaip3Q60769 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.38□□□□□ -0.11
Tnfaip3Q60769 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms