Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ClpbQ60649 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
ClpbQ60649 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.71□□□□□ -0.05
ClpbQ60649 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ClpbQ60649 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
ClpbQ60649 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
ClpbQ60649 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
ClpbQ60649 Gm11780-201ENSMUST00000136880 516 ntBASIC14.71□□□□□ -0.05
ClpbQ60649 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
ClpbQ60649 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
ClpbQ60649 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ClpbQ60649 Gm6089-201ENSMUST00000197666 938 ntBASIC14.71□□□□□ -0.05
ClpbQ60649 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ClpbQ60649 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ClpbQ60649 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ClpbQ60649 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ClpbQ60649 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ClpbQ60649 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
ClpbQ60649 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.71□□□□□ -0.05
ClpbQ60649 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ClpbQ60649 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
ClpbQ60649 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.71□□□□□ -0.06
ClpbQ60649 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ClpbQ60649 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
ClpbQ60649 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
ClpbQ60649 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.7□□□□□ -0.06
ClpbQ60649 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ClpbQ60649 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
ClpbQ60649 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ClpbQ60649 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ClpbQ60649 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ClpbQ60649 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.7□□□□□ -0.06
ClpbQ60649 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ClpbQ60649 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ClpbQ60649 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.7□□□□□ -0.06
ClpbQ60649 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ClpbQ60649 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.7□□□□□ -0.06
ClpbQ60649 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ClpbQ60649 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.7□□□□□ -0.06
ClpbQ60649 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ClpbQ60649 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.7□□□□□ -0.06
ClpbQ60649 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ClpbQ60649 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ClpbQ60649 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.7□□□□□ -0.06
ClpbQ60649 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ClpbQ60649 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ClpbQ60649 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
ClpbQ60649 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ClpbQ60649 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
ClpbQ60649 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ClpbQ60649 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ClpbQ60649 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ClpbQ60649 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ClpbQ60649 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
ClpbQ60649 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
ClpbQ60649 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.69□□□□□ -0.06
ClpbQ60649 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ClpbQ60649 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ClpbQ60649 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ClpbQ60649 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ClpbQ60649 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ClpbQ60649 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
ClpbQ60649 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
ClpbQ60649 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ClpbQ60649 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.69□□□□□ -0.06
ClpbQ60649 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.69□□□□□ -0.06
ClpbQ60649 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ClpbQ60649 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ClpbQ60649 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ClpbQ60649 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ClpbQ60649 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ClpbQ60649 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ClpbQ60649 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ClpbQ60649 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ClpbQ60649 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ClpbQ60649 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ClpbQ60649 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ClpbQ60649 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
ClpbQ60649 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ClpbQ60649 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ClpbQ60649 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ClpbQ60649 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ClpbQ60649 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ClpbQ60649 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ClpbQ60649 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ClpbQ60649 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ClpbQ60649 Gm7222-201ENSMUST00000117512 906 ntBASIC14.68□□□□□ -0.06
ClpbQ60649 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.68□□□□□ -0.06
ClpbQ60649 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.68□□□□□ -0.06
ClpbQ60649 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ClpbQ60649 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ClpbQ60649 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ClpbQ60649 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ClpbQ60649 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ClpbQ60649 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.68□□□□□ -0.06
ClpbQ60649 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ClpbQ60649 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ClpbQ60649 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
ClpbQ60649 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
ClpbQ60649 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms