Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scaf1Q5U4C3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scaf1Q5U4C3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scaf1Q5U4C3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scaf1Q5U4C3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scaf1Q5U4C3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Scaf1Q5U4C3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Scaf1Q5U4C3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC19.87■□□□□ 0.77
Scaf1Q5U4C3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scaf1Q5U4C3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scaf1Q5U4C3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Mir8102-201ENSMUST00000184148 139 ntBASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf1Q5U4C3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scaf1Q5U4C3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.85■□□□□ 0.77
Scaf1Q5U4C3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scaf1Q5U4C3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scaf1Q5U4C3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scaf1Q5U4C3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scaf1Q5U4C3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scaf1Q5U4C3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scaf1Q5U4C3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scaf1Q5U4C3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scaf1Q5U4C3 Gm18766-201ENSMUST00000189811 808 ntBASIC19.85■□□□□ 0.77
Scaf1Q5U4C3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC19.85■□□□□ 0.77
Scaf1Q5U4C3 Gm5049-201ENSMUST00000195878 1590 ntBASIC19.85■□□□□ 0.77
Scaf1Q5U4C3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC19.85■□□□□ 0.77
Scaf1Q5U4C3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scaf1Q5U4C3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Scaf1Q5U4C3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scaf1Q5U4C3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scaf1Q5U4C3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scaf1Q5U4C3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scaf1Q5U4C3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scaf1Q5U4C3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scaf1Q5U4C3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Scaf1Q5U4C3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Scaf1Q5U4C3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scaf1Q5U4C3 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Scaf1Q5U4C3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scaf1Q5U4C3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Scaf1Q5U4C3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scaf1Q5U4C3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scaf1Q5U4C3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scaf1Q5U4C3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scaf1Q5U4C3 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scaf1Q5U4C3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC19.84■□□□□ 0.77
Scaf1Q5U4C3 Gm37277-201ENSMUST00000194052 1111 ntBASIC19.84■□□□□ 0.77
Scaf1Q5U4C3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC19.84■□□□□ 0.77
Scaf1Q5U4C3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scaf1Q5U4C3 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scaf1Q5U4C3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scaf1Q5U4C3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scaf1Q5U4C3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scaf1Q5U4C3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.84■□□□□ 0.77
Scaf1Q5U4C3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scaf1Q5U4C3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scaf1Q5U4C3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Scaf1Q5U4C3 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
Scaf1Q5U4C3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scaf1Q5U4C3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC19.83■□□□□ 0.77
Scaf1Q5U4C3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scaf1Q5U4C3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
Scaf1Q5U4C3 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Scaf1Q5U4C3 Gm14767-201ENSMUST00000121559 586 ntBASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms