Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm13597-201ENSMUST00000121239 375 ntBASIC16.29■□□□□ 0.2
Shroom1Q5SX79 Gm11025-201ENSMUST00000140773 466 ntBASIC16.29■□□□□ 0.2
Shroom1Q5SX79 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.29■□□□□ 0.2
Shroom1Q5SX79 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.29■□□□□ 0.2
Shroom1Q5SX79 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.29■□□□□ 0.2
Shroom1Q5SX79 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Shroom1Q5SX79 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shroom1Q5SX79 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shroom1Q5SX79 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shroom1Q5SX79 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shroom1Q5SX79 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shroom1Q5SX79 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shroom1Q5SX79 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.29■□□□□ 0.2
Shroom1Q5SX79 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Shroom1Q5SX79 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shroom1Q5SX79 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Shroom1Q5SX79 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Asic1-205ENSMUST00000228185 1818 ntBASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom1Q5SX79 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shroom1Q5SX79 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.27■□□□□ 0.2
Shroom1Q5SX79 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shroom1Q5SX79 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.27■□□□□ 0.2
Shroom1Q5SX79 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shroom1Q5SX79 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shroom1Q5SX79 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shroom1Q5SX79 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shroom1Q5SX79 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shroom1Q5SX79 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.27■□□□□ 0.2
Shroom1Q5SX79 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.27■□□□□ 0.2
Shroom1Q5SX79 Gm17968-201ENSMUST00000194902 784 ntBASIC16.27■□□□□ 0.2
Shroom1Q5SX79 Gm44492-201ENSMUST00000197012 141 ntBASIC16.27■□□□□ 0.2
Shroom1Q5SX79 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
Shroom1Q5SX79 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shroom1Q5SX79 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shroom1Q5SX79 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shroom1Q5SX79 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Shroom1Q5SX79 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shroom1Q5SX79 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shroom1Q5SX79 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shroom1Q5SX79 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shroom1Q5SX79 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.26■□□□□ 0.19
Shroom1Q5SX79 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms