Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Gm29791-202ENSMUST00000207888 369 ntBASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Gm43056-201ENSMUST00000197865 2791 ntBASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-1Q5R1I8 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Gm42872-201ENSMUST00000200026 1967 ntBASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms