Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav8d-1Q5R1H8 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 Efs-202ENSMUST00000227037 2540 ntBASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8d-1Q5R1H8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.58□□□□□ -0.39
Trav8d-1Q5R1H8 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Trav8d-1Q5R1H8 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Trav8d-1Q5R1H8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav8d-1Q5R1H8 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Gm37722-201ENSMUST00000193757 208 ntBASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Gm10566-201ENSMUST00000086739 996 ntBASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8d-1Q5R1H8 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms