Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav6-3Q5R1E6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-3Q5R1E6 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Gm27867-201ENSMUST00000184778 125 ntBASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Gm27704-201ENSMUST00000185094 107 ntBASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Gm8655-201ENSMUST00000221159 852 ntBASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-3Q5R1E6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-3Q5R1E6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-3Q5R1E6 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.28□□□□□ -0.44
Trav6-3Q5R1E6 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-3Q5R1E6 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav6-3Q5R1E6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-3Q5R1E6 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Trav6-3Q5R1E6 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-3Q5R1E6 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-3Q5R1E6 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-3Q5R1E6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-3Q5R1E6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-3Q5R1E6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav6-3Q5R1E6 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-3Q5R1E6 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-3Q5R1E6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Trav6-3Q5R1E6 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-3Q5R1E6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trav6-3Q5R1E6 Gm13836-201ENSMUST00000121159 501 ntBASIC12.28□□□□□ -0.44
Trav6-3Q5R1E6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-3Q5R1E6 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-3Q5R1E6 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms