Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdv4Q5R1A3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trdv4Q5R1A3 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdv4Q5R1A3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Trdv4Q5R1A3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdv4Q5R1A3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdv4Q5R1A3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdv4Q5R1A3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Trdv4Q5R1A3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdv4Q5R1A3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.65□□□□□ -0.38
Trdv4Q5R1A3 Gm27459-201ENSMUST00000184860 107 ntBASIC12.65□□□□□ -0.38
Trdv4Q5R1A3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trdv4Q5R1A3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.65□□□□□ -0.38
Trdv4Q5R1A3 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdv4Q5R1A3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trdv4Q5R1A3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trdv4Q5R1A3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdv4Q5R1A3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdv4Q5R1A3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdv4Q5R1A3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdv4Q5R1A3 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trdv4Q5R1A3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdv4Q5R1A3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdv4Q5R1A3 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trdv4Q5R1A3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Gm11780-201ENSMUST00000136880 516 ntBASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Gm4535-201ENSMUST00000182274 558 ntBASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Gm10355-201ENSMUST00000097146 517 ntBASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Grk6-207ENSMUST00000225925 2769 ntBASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdv4Q5R1A3 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Sybu-209ENSMUST00000228639 4113 ntBASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Gm24589-201ENSMUST00000116692 94 ntBASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Gm44357-201ENSMUST00000195897 142 ntBASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Gm19658-201ENSMUST00000196231 138 ntBASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Gm44367-201ENSMUST00000196836 138 ntBASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Gm44350-201ENSMUST00000197197 138 ntBASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Gm44390-201ENSMUST00000197533 144 ntBASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Gm44313-201ENSMUST00000198018 138 ntBASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Gm44486-201ENSMUST00000198508 138 ntBASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Gm44314-201ENSMUST00000199263 138 ntBASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Gm44394-201ENSMUST00000199558 138 ntBASIC12.63□□□□□ -0.39
Trdv4Q5R1A3 Gm44484-201ENSMUST00000199873 138 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms