Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.16■□□□□ 0.02
Scn2bQ56A07 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn2bQ56A07 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn2bQ56A07 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn2bQ56A07 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn2bQ56A07 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Scn2bQ56A07 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.15■□□□□ 0.02
Scn2bQ56A07 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.15■□□□□ 0.02
Scn2bQ56A07 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.15■□□□□ 0.02
Scn2bQ56A07 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.15■□□□□ 0.02
Scn2bQ56A07 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.15■□□□□ 0.02
Scn2bQ56A07 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.15■□□□□ 0.02
Scn2bQ56A07 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.15■□□□□ 0.02
Scn2bQ56A07 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.15■□□□□ 0.02
Scn2bQ56A07 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.15■□□□□ 0.02
Scn2bQ56A07 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.15■□□□□ 0.02
Scn2bQ56A07 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.15■□□□□ 0.02
Scn2bQ56A07 Gm8825-201ENSMUST00000182565 998 ntBASIC15.15■□□□□ 0.02
Scn2bQ56A07 Gm4518-201ENSMUST00000182638 718 ntBASIC15.15■□□□□ 0.02
Scn2bQ56A07 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.15■□□□□ 0.02
Scn2bQ56A07 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.15■□□□□ 0.02
Scn2bQ56A07 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.15■□□□□ 0.02
Scn2bQ56A07 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.15■□□□□ 0.02
Scn2bQ56A07 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.15■□□□□ 0.02
Scn2bQ56A07 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.15■□□□□ 0.02
Scn2bQ56A07 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.15■□□□□ 0.02
Scn2bQ56A07 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn2bQ56A07 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn2bQ56A07 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Scn2bQ56A07 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn2bQ56A07 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Scn2bQ56A07 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn2bQ56A07 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Scn2bQ56A07 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn2bQ56A07 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn2bQ56A07 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn2bQ56A07 Gm15165-201ENSMUST00000118140 502 ntBASIC15.13■□□□□ 0.01
Scn2bQ56A07 Gm15372-201ENSMUST00000120729 834 ntBASIC15.13■□□□□ 0.01
Scn2bQ56A07 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scn2bQ56A07 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn2bQ56A07 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn2bQ56A07 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.13■□□□□ 0.01
Scn2bQ56A07 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn2bQ56A07 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn2bQ56A07 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn2bQ56A07 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn2bQ56A07 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms