Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Herc2Q4U2R1 Gm6257-201ENSMUST00000163864 910 ntBASIC8.95□□□□□ -0.98
Herc2Q4U2R1 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Herc2Q4U2R1 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC8.95□□□□□ -0.98
Herc2Q4U2R1 AC149588.3-201ENSMUST00000227515 150 ntBASIC8.95□□□□□ -0.98
Herc2Q4U2R1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Herc2Q4U2R1 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC8.95□□□□□ -0.98
Herc2Q4U2R1 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Herc2Q4U2R1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Herc2Q4U2R1 Gm8652-201ENSMUST00000181363 964 ntBASIC8.95□□□□□ -0.98
Herc2Q4U2R1 Gm42442-201ENSMUST00000197951 1133 ntBASIC8.95□□□□□ -0.98
Herc2Q4U2R1 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Herc2Q4U2R1 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Herc2Q4U2R1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Herc2Q4U2R1 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Herc2Q4U2R1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Herc2Q4U2R1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Herc2Q4U2R1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Herc2Q4U2R1 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Mir7654-201ENSMUST00000185082 70 ntBASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Gm9826-201ENSMUST00000029124 1299 ntBASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Gm8099-201ENSMUST00000200510 742 ntBASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Gm7553-201ENSMUST00000185805 1426 ntBASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Gm14452-201ENSMUST00000118680 1632 ntBASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Gm38341-201ENSMUST00000195357 515 ntBASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Gm10012-201ENSMUST00000078252 192 ntBASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Herc2Q4U2R1 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Gm45774-201ENSMUST00000211992 2665 ntBASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Gm11628-201ENSMUST00000117568 171 ntBASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Gm37519-201ENSMUST00000191687 2210 ntBASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Gm14026-201ENSMUST00000120625 1789 ntBASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Gm36858-201ENSMUST00000194501 2391 ntBASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Proscos-202ENSMUST00000178990 666 ntBASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Herc2Q4U2R1 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms