Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx49Q4FZF3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx49Q4FZF3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Ddx49Q4FZF3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx49Q4FZF3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Ddx49Q4FZF3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx49Q4FZF3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ddx49Q4FZF3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx49Q4FZF3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx49Q4FZF3 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx49Q4FZF3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx49Q4FZF3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx49Q4FZF3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx49Q4FZF3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx49Q4FZF3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx49Q4FZF3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx49Q4FZF3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx49Q4FZF3 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx49Q4FZF3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx49Q4FZF3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx49Q4FZF3 Gm11424-201ENSMUST00000121929 829 ntBASIC17.8■□□□□ 0.44
Ddx49Q4FZF3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx49Q4FZF3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx49Q4FZF3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx49Q4FZF3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx49Q4FZF3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx49Q4FZF3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Ddx49Q4FZF3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx49Q4FZF3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx49Q4FZF3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ddx49Q4FZF3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Gm12151-201ENSMUST00000121374 290 ntBASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx49Q4FZF3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx49Q4FZF3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Ddx49Q4FZF3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx49Q4FZF3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.78■□□□□ 0.44
Ddx49Q4FZF3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ddx49Q4FZF3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ddx49Q4FZF3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx49Q4FZF3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx49Q4FZF3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ddx49Q4FZF3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx49Q4FZF3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx49Q4FZF3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx49Q4FZF3 Gm25287-201ENSMUST00000103846 110 ntBASIC17.78■□□□□ 0.44
Ddx49Q4FZF3 Gm22918-201ENSMUST00000103855 110 ntBASIC17.78■□□□□ 0.44
Ddx49Q4FZF3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx49Q4FZF3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Ddx49Q4FZF3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.78■□□□□ 0.44
Ddx49Q4FZF3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.78■□□□□ 0.44
Ddx49Q4FZF3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx49Q4FZF3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx49Q4FZF3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx49Q4FZF3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx49Q4FZF3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx49Q4FZF3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx49Q4FZF3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx49Q4FZF3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx49Q4FZF3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx49Q4FZF3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx49Q4FZF3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx49Q4FZF3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Ddx49Q4FZF3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx49Q4FZF3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ddx49Q4FZF3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx49Q4FZF3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx49Q4FZF3 Gm5866-201ENSMUST00000177881 973 ntBASIC17.77■□□□□ 0.44
Ddx49Q4FZF3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.77■□□□□ 0.44
Ddx49Q4FZF3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.77■□□□□ 0.44
Ddx49Q4FZF3 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms