Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC18.82■□□□□ 0.6
Shank3Q4ACU6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shank3Q4ACU6 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shank3Q4ACU6 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shank3Q4ACU6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Shank3Q4ACU6 Mir1938-201ENSMUST00000158746 100 ntBASIC18.81■□□□□ 0.6
Shank3Q4ACU6 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shank3Q4ACU6 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shank3Q4ACU6 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Shank3Q4ACU6 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Shank3Q4ACU6 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shank3Q4ACU6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Shank3Q4ACU6 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shank3Q4ACU6 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Shank3Q4ACU6 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC18.8■□□□□ 0.6
Shank3Q4ACU6 Gm12091-201ENSMUST00000146791 830 ntBASIC18.8■□□□□ 0.6
Shank3Q4ACU6 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Shank3Q4ACU6 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Shank3Q4ACU6 Gm18624-201ENSMUST00000220966 658 ntBASIC18.8■□□□□ 0.6
Shank3Q4ACU6 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC18.8■□□□□ 0.6
Shank3Q4ACU6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shank3Q4ACU6 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shank3Q4ACU6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC18.8■□□□□ 0.6
Shank3Q4ACU6 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shank3Q4ACU6 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.8■□□□□ 0.6
Shank3Q4ACU6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shank3Q4ACU6 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shank3Q4ACU6 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC18.8■□□□□ 0.6
Shank3Q4ACU6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Shank3Q4ACU6 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shank3Q4ACU6 Gm13464-201ENSMUST00000119418 935 ntBASIC18.8■□□□□ 0.6
Shank3Q4ACU6 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC18.8■□□□□ 0.6
Shank3Q4ACU6 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Shank3Q4ACU6 Gm18018-201ENSMUST00000198273 408 ntBASIC18.8■□□□□ 0.6
Shank3Q4ACU6 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Shank3Q4ACU6 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Shank3Q4ACU6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shank3Q4ACU6 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.79■□□□□ 0.6
Shank3Q4ACU6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shank3Q4ACU6 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shank3Q4ACU6 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shank3Q4ACU6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shank3Q4ACU6 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shank3Q4ACU6 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shank3Q4ACU6 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shank3Q4ACU6 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC18.79■□□□□ 0.6
Shank3Q4ACU6 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC18.79■□□□□ 0.6
Shank3Q4ACU6 Gm27631-201ENSMUST00000184163 466 ntBASIC18.79■□□□□ 0.6
Shank3Q4ACU6 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC18.79■□□□□ 0.6
Shank3Q4ACU6 Gm9908-201ENSMUST00000211534 448 ntBASIC18.79■□□□□ 0.6
Shank3Q4ACU6 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shank3Q4ACU6 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Shank3Q4ACU6 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shank3Q4ACU6 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.79■□□□□ 0.6
Shank3Q4ACU6 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Shank3Q4ACU6 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shank3Q4ACU6 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shank3Q4ACU6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shank3Q4ACU6 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shank3Q4ACU6 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shank3Q4ACU6 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC18.78■□□□□ 0.6
Shank3Q4ACU6 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC18.78■□□□□ 0.6
Shank3Q4ACU6 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC18.78■□□□□ 0.6
Shank3Q4ACU6 AC156016.3-201ENSMUST00000228623 344 ntBASIC18.78■□□□□ 0.6
Shank3Q4ACU6 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.78■□□□□ 0.6
Shank3Q4ACU6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shank3Q4ACU6 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shank3Q4ACU6 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shank3Q4ACU6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shank3Q4ACU6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shank3Q4ACU6 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shank3Q4ACU6 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Shank3Q4ACU6 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Shank3Q4ACU6 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Shank3Q4ACU6 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Shank3Q4ACU6 Gm15678-201ENSMUST00000117573 960 ntBASIC18.77■□□□□ 0.6
Shank3Q4ACU6 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Shank3Q4ACU6 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC18.77■□□□□ 0.6
Shank3Q4ACU6 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Shank3Q4ACU6 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC18.77■□□□□ 0.6
Shank3Q4ACU6 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC18.77■□□□□ 0.6
Shank3Q4ACU6 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shank3Q4ACU6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shank3Q4ACU6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Shank3Q4ACU6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shank3Q4ACU6 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Shank3Q4ACU6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shank3Q4ACU6 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Shank3Q4ACU6 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Shank3Q4ACU6 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shank3Q4ACU6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Shank3Q4ACU6 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC18.77■□□□□ 0.59
Shank3Q4ACU6 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Shank3Q4ACU6 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Shank3Q4ACU6 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Shank3Q4ACU6 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
Shank3Q4ACU6 AC159006.1-201ENSMUST00000226396 258 ntBASIC18.77■□□□□ 0.59
Shank3Q4ACU6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Shank3Q4ACU6 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shank3Q4ACU6 Tcf21-202ENSMUST00000218002 1788 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms