Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Gm9385-201ENSMUST00000117563 472 ntBASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.82□□□□□ -0.04
Rnf223Q3UV31 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Rnf223Q3UV31 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rnf223Q3UV31 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf223Q3UV31 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf223Q3UV31 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf223Q3UV31 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Rnf223Q3UV31 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.8□□□□□ -0.04
Rnf223Q3UV31 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.8□□□□□ -0.04
Rnf223Q3UV31 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf223Q3UV31 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf223Q3UV31 Gm20553-201ENSMUST00000204205 844 ntBASIC14.8□□□□□ -0.04
Rnf223Q3UV31 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.8□□□□□ -0.04
Rnf223Q3UV31 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf223Q3UV31 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf223Q3UV31 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf223Q3UV31 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.8□□□□□ -0.04
Rnf223Q3UV31 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf223Q3UV31 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf223Q3UV31 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rnf223Q3UV31 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf223Q3UV31 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf223Q3UV31 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf223Q3UV31 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf223Q3UV31 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf223Q3UV31 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf223Q3UV31 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Rnf223Q3UV31 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf223Q3UV31 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf223Q3UV31 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Rnf223Q3UV31 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf223Q3UV31 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf223Q3UV31 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf223Q3UV31 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Rnf223Q3UV31 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf223Q3UV31 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf223Q3UV31 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf223Q3UV31 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf223Q3UV31 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf223Q3UV31 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf223Q3UV31 Gm26308-201ENSMUST00000157768 69 ntBASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms