Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Efs-202ENSMUST00000227037 2540 ntBASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Actl10-202ENSMUST00000226583 1501 ntBASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Gm6211-202ENSMUST00000167849 925 ntBASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Gm10517-202ENSMUST00000192970 758 ntBASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cks1brtQ3UNC9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1brtQ3UNC9 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms