Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Naf1Q3UMQ8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Naf1Q3UMQ8 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Naf1Q3UMQ8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Naf1Q3UMQ8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Naf1Q3UMQ8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Naf1Q3UMQ8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Naf1Q3UMQ8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Naf1Q3UMQ8 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Naf1Q3UMQ8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Naf1Q3UMQ8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Naf1Q3UMQ8 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.56■□□□□ 0.08
Naf1Q3UMQ8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Naf1Q3UMQ8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Naf1Q3UMQ8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Naf1Q3UMQ8 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.56■□□□□ 0.08
Naf1Q3UMQ8 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Naf1Q3UMQ8 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Naf1Q3UMQ8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Naf1Q3UMQ8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Naf1Q3UMQ8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Naf1Q3UMQ8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.56■□□□□ 0.08
Naf1Q3UMQ8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Naf1Q3UMQ8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Naf1Q3UMQ8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Naf1Q3UMQ8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Naf1Q3UMQ8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Naf1Q3UMQ8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.55■□□□□ 0.08
Naf1Q3UMQ8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Naf1Q3UMQ8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.55■□□□□ 0.08
Naf1Q3UMQ8 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Naf1Q3UMQ8 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Naf1Q3UMQ8 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Naf1Q3UMQ8 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Naf1Q3UMQ8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Naf1Q3UMQ8 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Naf1Q3UMQ8 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Naf1Q3UMQ8 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Naf1Q3UMQ8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Naf1Q3UMQ8 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Naf1Q3UMQ8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Naf1Q3UMQ8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Naf1Q3UMQ8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Naf1Q3UMQ8 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Naf1Q3UMQ8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Naf1Q3UMQ8 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Gm10499-201ENSMUST00000174094 934 ntBASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Naf1Q3UMQ8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms