Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Gm28033-201ENSMUST00000184224 96 ntBASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brf2Q3UAW9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.44□□□□□ -0.1
Brf2Q3UAW9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Brf2Q3UAW9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brf2Q3UAW9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brf2Q3UAW9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Brf2Q3UAW9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brf2Q3UAW9 Gm15358-201ENSMUST00000119249 520 ntBASIC14.44□□□□□ -0.1
Brf2Q3UAW9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.44□□□□□ -0.1
Brf2Q3UAW9 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brf2Q3UAW9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Brf2Q3UAW9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brf2Q3UAW9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brf2Q3UAW9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Brf2Q3UAW9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Brf2Q3UAW9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brf2Q3UAW9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Brf2Q3UAW9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brf2Q3UAW9 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 BC037039-201ENSMUST00000192003 2205 ntBASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brf2Q3UAW9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms