Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm15823-201ENSMUST00000064305 670 ntBASIC17.99■□□□□ 0.47
Col5a2Q3U962 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.99■□□□□ 0.47
Col5a2Q3U962 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col5a2Q3U962 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Col5a2Q3U962 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.99■□□□□ 0.47
Col5a2Q3U962 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col5a2Q3U962 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.98■□□□□ 0.47
Col5a2Q3U962 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Gm3436-201ENSMUST00000179930 840 ntBASIC17.98■□□□□ 0.47
Col5a2Q3U962 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Gm8602-201ENSMUST00000184045 607 ntBASIC17.98■□□□□ 0.47
Col5a2Q3U962 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Col5a2Q3U962 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.98■□□□□ 0.47
Col5a2Q3U962 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.98■□□□□ 0.47
Col5a2Q3U962 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col5a2Q3U962 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col5a2Q3U962 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col5a2Q3U962 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col5a2Q3U962 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col5a2Q3U962 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col5a2Q3U962 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col5a2Q3U962 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col5a2Q3U962 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Col5a2Q3U962 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col5a2Q3U962 Mir1938-201ENSMUST00000158746 100 ntBASIC17.97■□□□□ 0.47
Col5a2Q3U962 Gm21854-201ENSMUST00000179901 471 ntBASIC17.97■□□□□ 0.47
Col5a2Q3U962 Gm43630-201ENSMUST00000201550 776 ntBASIC17.97■□□□□ 0.47
Col5a2Q3U962 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.97■□□□□ 0.47
Col5a2Q3U962 Gm16476-201ENSMUST00000221544 139 ntBASIC17.97■□□□□ 0.47
Col5a2Q3U962 Dupd1-202ENSMUST00000224735 548 ntBASIC17.97■□□□□ 0.47
Col5a2Q3U962 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col5a2Q3U962 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col5a2Q3U962 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC17.97■□□□□ 0.47
Col5a2Q3U962 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Col5a2Q3U962 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col5a2Q3U962 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Col5a2Q3U962 Gm9115-201ENSMUST00000120192 1348 ntBASIC17.97■□□□□ 0.47
Col5a2Q3U962 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Col5a2Q3U962 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col5a2Q3U962 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col5a2Q3U962 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col5a2Q3U962 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col5a2Q3U962 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.96■□□□□ 0.47
Col5a2Q3U962 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC17.96■□□□□ 0.47
Col5a2Q3U962 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col5a2Q3U962 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col5a2Q3U962 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col5a2Q3U962 Gm6007-201ENSMUST00000208170 823 ntBASIC17.96■□□□□ 0.47
Col5a2Q3U962 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col5a2Q3U962 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col5a2Q3U962 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col5a2Q3U962 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Col5a2Q3U962 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col5a2Q3U962 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Col5a2Q3U962 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col5a2Q3U962 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col5a2Q3U962 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col5a2Q3U962 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col5a2Q3U962 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col5a2Q3U962 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col5a2Q3U962 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Col5a2Q3U962 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Col5a2Q3U962 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col5a2Q3U962 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col5a2Q3U962 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col5a2Q3U962 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC17.95■□□□□ 0.46
Col5a2Q3U962 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC17.95■□□□□ 0.46
Col5a2Q3U962 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col5a2Q3U962 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col5a2Q3U962 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col5a2Q3U962 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Col5a2Q3U962 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col5a2Q3U962 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col5a2Q3U962 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col5a2Q3U962 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col5a2Q3U962 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Col5a2Q3U962 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms