Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rnf180Q3U827 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rnf180Q3U827 Mir7070-201ENSMUST00000183657 86 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm27847-201ENSMUST00000183711 107 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm27375-201ENSMUST00000183799 107 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm29310-201ENSMUST00000185468 696 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm21825-201ENSMUST00000185728 696 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm29109-201ENSMUST00000185895 696 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm21896-201ENSMUST00000186520 696 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm21873-201ENSMUST00000186728 696 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm21794-201ENSMUST00000187056 696 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm21880-201ENSMUST00000187275 696 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm21826-201ENSMUST00000187451 696 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm21198-201ENSMUST00000188393 696 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm21749-201ENSMUST00000189343 696 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm21901-201ENSMUST00000189568 696 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm29424-201ENSMUST00000189716 696 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm28599-201ENSMUST00000189838 694 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm21867-201ENSMUST00000189917 696 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm29269-201ENSMUST00000190087 696 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm21722-201ENSMUST00000190153 696 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm28423-201ENSMUST00000190701 696 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm21899-201ENSMUST00000190745 696 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm21910-201ENSMUST00000191163 696 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm21849-201ENSMUST00000191571 696 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm28678-201ENSMUST00000191593 696 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm20910-201ENSMUST00000193268 696 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm21871-201ENSMUST00000194621 696 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm7561-201ENSMUST00000211203 886 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 CU024892.2-201ENSMUST00000224608 832 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 AC154846.1-201ENSMUST00000226278 862 ntBASIC17.82■□□□□ 0.44
Rnf180Q3U827 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf180Q3U827 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf180Q3U827 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.82■□□□□ 0.44
Rnf180Q3U827 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf180Q3U827 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf180Q3U827 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf180Q3U827 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rnf180Q3U827 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rnf180Q3U827 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf180Q3U827 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.82■□□□□ 0.44
Rnf180Q3U827 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf180Q3U827 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.81■□□□□ 0.44
Rnf180Q3U827 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rnf180Q3U827 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf180Q3U827 Gm15808-201ENSMUST00000119046 604 ntBASIC17.81■□□□□ 0.44
Rnf180Q3U827 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf180Q3U827 Gm38266-201ENSMUST00000194931 421 ntBASIC17.81■□□□□ 0.44
Rnf180Q3U827 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC17.81■□□□□ 0.44
Rnf180Q3U827 Gm18054-201ENSMUST00000207539 555 ntBASIC17.81■□□□□ 0.44
Rnf180Q3U827 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf180Q3U827 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf180Q3U827 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rnf180Q3U827 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rnf180Q3U827 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rnf180Q3U827 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf180Q3U827 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf180Q3U827 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rnf180Q3U827 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf180Q3U827 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf180Q3U827 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf180Q3U827 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf180Q3U827 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf180Q3U827 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf180Q3U827 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf180Q3U827 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf180Q3U827 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf180Q3U827 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf180Q3U827 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf180Q3U827 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf180Q3U827 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rnf180Q3U827 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC17.8■□□□□ 0.44
Rnf180Q3U827 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf180Q3U827 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf180Q3U827 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf180Q3U827 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf180Q3U827 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf180Q3U827 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf180Q3U827 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf180Q3U827 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf180Q3U827 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf180Q3U827 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf180Q3U827 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf180Q3U827 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf180Q3U827 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf180Q3U827 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.79■□□□□ 0.44
Rnf180Q3U827 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf180Q3U827 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf180Q3U827 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rnf180Q3U827 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf180Q3U827 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf180Q3U827 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf180Q3U827 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf180Q3U827 Gm8565-201ENSMUST00000183259 1014 ntBASIC17.79■□□□□ 0.44
Rnf180Q3U827 Gm29127-201ENSMUST00000188304 517 ntBASIC17.79■□□□□ 0.44
Rnf180Q3U827 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Rnf180Q3U827 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf180Q3U827 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf180Q3U827 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Rnf180Q3U827 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms